Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele43g0082 ATGGGGATTCAGTGCTCCAAACTCATGCCGTGTTGTGCGAATTCTCAAGTAAAGGCTTCTGTTCTTGAAGCTCCAGATAATGAAAAGGAGGATAGAAGTGAGGCTAGTAACTGGCCTGCATTCCGTGAATTTTCATTGGAGCAACTAAAGAATGCAACATCTGGTTTTGCTGTTGAGAATATTGTATCTGAACATGGAGAGAAGGCGCCAAATGTTGTTTATAAAGGGAAGCTGGAGAATCAAATGAGGATTGCTGTTAAGCGCTTTAATAGAAACGCTTGGCCTGATGGCCGGCAGTTTTTGGAGGAAGCAAGATCTGTTGGTGAGCTCCGCAACCATCGATTAGCAAATTTGATTGGTTGTTCTTGTGAAGGTGATGAGAGGCTGCTTGTGGCAGAATTTATGCCGAATGAAACACTGGCAAAACACCTTTTCCATTGGGAAACTCAACCTATGAAATGGGCAATGCGATTAAGAGTTGTGTTCCATCTTGCCCAAGCTCTAGAATATTGCACAGGAAAAGGACGAGCCCTCTATCATGACCTTAATGCATACAGAGTTTTATTTGATGAGGAGGGCAATCCTAGGCTTTCAACTTTTGGCCTTATGAAGAATAGTAGGGATGGGAAAAGTTATAGCACAAATTTGGCTTTTACCCCTCCAGAATATCTGAGAACTGGGAGAGTAACACCAGAAAGTGTAATATATAGTTTTGGCACTCTTTTGCTTGACCTTCTCAGTGGGAAGCATATCCCCCCAAGCCATGCCCTTGATTTAATTCGGGACAGAAATCTTCAAATGCTGACAGATTCTTGTTTGGAAGGACAATTTTCTGATGATGATGGAACTGAGTTGGTACGCTTGGCATCTCGATGCTTACAGTATGAGCCTAGAGAAAGGCCAAGTCCTAGATCATTGGTGGCTGCCTTGGCTCCTCTTCAGAAAGATACAGAGGTTTCTTCACATGTCTTGATGGGAATCCCACATGGTGATGCTACTTTTGCTTCGTTGTCCCCACTTGGTGAAGCATGCTCGAGAAAGGATTTGACTGCCATACATGAAGTTCTGGAAAATATGGCCTATAAAGACGATGAAGGAGTGACAAACGAGTTATCGTTCCAGGTTTGGACTGATGAAATGCAGGAAACACTTAACAGTAAGAAAAAGGGGGATGTTGCTTTCCAGCAGAAGGATTTTAGAGTTGCAACAGAGTGCTACACACAGTTCATTGATGGTGGAATAGTGGTTTCTCCAACTGTCTATGCGCGGCGAAGTTTGTGTTATCTCGTCGGCAACATGCCCCAGGAAGCACTGAACGATGCAATGCAAGCACAAGTCATATCCCCCGTATGGCACATAGCATCATATCTTCAATTTCTTGCCCTCACTGGACTTGGCATGGAGAATGAAGCTCAAGTAGCACTTAAAGAGGGCACAGATTTGGAAGCCAAGAGAAGTGGAACTTCTGGGCATAAATGA 1479 0.4381 MGIQCSKLMPCCANSQVKASVLEAPDNEKEDRSEASNWPAFREFSLEQLKNATSGFAVENIVSEHGEKAPNVVYKGKLENQMRIAVKRFNRNAWPDGRQFLEEARSVGELRNHRLANLIGCSCEGDERLLVAEFMPNETLAKHLFHWETQPMKWAMRLRVVFHLAQALEYCTGKGRALYHDLNAYRVLFDEEGNPRLSTFGLMKNSRDGKSYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFSDDDGTELVRLASRCLQYEPRERPSPRSLVAALAPLQKDTEVSSHVLMGIPHGDATFASLSPLGEACSRKDLTAIHEVLENMAYKDDEGVTNELSFQVWTDEMQETLNSKKKGDVAFQQKDFRVATECYTQFIDGGIVVSPTVYARRSLCYLVGNMPQEALNDAMQAQVISPVWHIASYLQFLALTGLGMENEAQVALKEGTDLEAKRSGTSGHK 492
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele43g0082 492 Gene3D Transferase(Phosphotransferase) domain 1 136 328 - -
Lele43g0082 492 SUPERFAMILY TPR-like 385 485 IPR011990 GO:0005515
Lele43g0082 492 FunFam probable serine/threonine-protein kinase At4g35230 31 134 - -
Lele43g0082 492 SUPERFAMILY Protein kinase-like (PK-like) 34 317 IPR011009 -
Lele43g0082 492 ProSiteProfiles Protein kinase domain profile. 59 325 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele43g0082 492 Pfam Protein tyrosine and serine/threonine kinase 72 309 IPR001245 GO:0004672|GO:0006468
Lele43g0082 492 PANTHER SERINE/THREONINE-PROTEIN KINASE BSK5 17 486 IPR045845 GO:0004672|GO:0009742
Lele43g0082 492 Gene3D Tetratricopeptide repeat domain 381 489 IPR011990 GO:0005515
Lele43g0082 492 FunFam probable serine/threonine-protein kinase At5g41260 136 327 - -
Lele43g0082 492 Gene3D Phosphorylase Kinase; domain 1 29 134 - -
Lele43g0082 492 FunFam probable serine/threonine-protein kinase At4g35230 381 489 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele43g0082 Lele-ChrLele43 990236 994520 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele43g0082 20 331 Glycoside Hydrolase AT3G07070 33.529 2.02e-42 154
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-XII-1 Lele43g0082 PK_Tyr_Ser-Thr 2.8e-25 CL0016