Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele43g0050 ATGAACTTGCAATTTTTCTTTTCTCCTTTTGGTTTTGGTTTTCTGTATTCTGCATCTGATTACAAACTCGTGCCGTCAGCTCTACCAGATTCCTCCGTAGACCCCTCTCCCCTTCTTCATTACTCCGCTTCCGATCAAGTGCTCCGACGCACGTCGGGGTCGATACGGAGCGCGGCGCGGTTCTTCCGGCATGCGAGCGGGTGGCGGATGATGCTCAGGGAGCCGTCGGTGCCGGTGCGGGAGAACTTGGCGGAGCAGCTGGAGGCGCGTCAGAGTAACTGGGCGTTCTCGAAGCCGGTGGTGGTACTGGATATCGTTTGGAACTTGGCGTTTGTGATTAGCGGGATTGACGTTCTGGGGCTGAGCGTTGAGGAGAAGCTTGGACCATACATACAAGCCCAAGTTCGTCCTGCGCCCGAAGAAGATTATCAGAACGGGATTTCTTGGGAAAGAGGTGTAGATTTTAATTCTAGCTCTGGGAGTGATATTGGCGATGCAAATGTTTCTGGTGACGAACAGGATGATCAGGAAGGATATAGCATCAGAAAGCGAATGGAATCTGCAAATACTCTATTTTCATTCATATGGTGGCTTCTTGGATTTTATTGGATTACTACGGGGGGCCAGAGCCTGACCCAAGATGCCCCTCAGCTTTACTGATTGCATGGCTGTGGTTTTCAGGCTCTGTATCACCTTCCTTGCTATCGACATTGTAATTCTTTTTATCTGTGGTTGTGGCATGCCTTGTTGGTATTGCTGTTTGCTGCTGTCTGCCATGTATACTTTCATTTTCGTCAGTGGCGGCGGCTAAGTGACTTTTTAATGTGGGAGCAGGAAGGGTCAACCAAGGAAGAAATCAATCGGTTGCCGAAATACAAGTTCAGGAGGGCAGATGATTGGGATGATGCCCAAGCTTCATCTTGTAAAGGAATAGTGTCAGAATGTGACAGCGATACACCTGCAGAATATGTTCTTTCCACGGAAGTTGCAGAGTGCTGCATCTGCTTGTGTCCCTATGAGGATGGAGCAGAGCTAAGAGAACTTCCACGTAGTCACCATTTTCACGCGGAATGCATCGACAAGTGGTTGTACATCAACGCCAACTGTCCTCTCTGCAAGTTCAATTTTCATACGGGGAACCATTCACAAGTTTGA 1155 0.4883 MNLQFFFSPFGFGFLYSASDYKLVPSALPDSSVDPSPLLHYSASDQVLRRTSGSIRSAARFFRHASGWRMMLREPSVPVRENLAEQLEARQSNWAFSKPVVVLDIVWNLAFVISGIDVLGLSVEEKLGPYIQAQVRPAPEEDYQNGISWERGVDFNSSSGSDIGDANVSGDEQDDQEGYSIRKRMESANTLFSFIWWLLGFYWITTGGQSLTQDAPQLYXLHGCGFQALYHLPCYRHCNSFYLWLWHALLVLLFAAVCHVYFHFRQWRRLSDFLMWEQEGSTKEEINRLPKYKFRRADDWDDAQASSCKGIVSECDSDTPAEYVLSTEVAECCICLCPYEDGAELRELPRSHHFHAECIDKWLYINANCPLCKFNFHTGNHSQV 384
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele43g0050 384 SUPERFAMILY RING/U-box 285 378 - -
Lele43g0050 384 MobiDBLite consensus disorder prediction 150 166 - -
Lele43g0050 384 ProSiteProfiles Zinc finger RING-type profile. 332 373 IPR001841 -
Lele43g0050 384 PANTHER TARGET OF ERK KINASE MPK-1 66 378 - -
Lele43g0050 384 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 313 378 IPR013083 -
Lele43g0050 384 MobiDBLite consensus disorder prediction 150 174 - -
Lele43g0050 384 Pfam Ring finger domain 331 373 IPR001841 -
Lele43g0050 384 CDD RING-H2_RNF111_like 331 375 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele43g0050 Lele-ChrLele43 806835 811125 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele43g0050 43 383 C3H Transcription Factor Family AT1G68070 34.174 8.87e-54 179