Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele43g0049 ATGAATATGATGCGACGGCTGAAGAGCATTGCTTCTGGGCGGACTTCCATTTCGTCAGATCCTGGAGGGGATTCTAACACCAAGAGACCTAAGTTTGATCAAGAAACTGAAGGAAGAGTCAATGAGGAAACAAATCCTGTTGATAGAGGCAGCACACATATGGAGCAACATGTTTGTGCGCCAGGGGATACTACTGTAGGCACATCCAATGCATCCACGGTGGAGAGAACGGAGAAATCAGGTTATGATCAGCTTCCTAAAGAATTGAATGAAATGAAAATTAGAGATGAGAAAGGCAACAACTGCAATGAAAAGGATATGGAGCCAGCTATTGTGAACGGTAACGGAACTGAAACGGGGCAGGTAATTACTACAGCTATTGGTGGTCGTGATGGACAACCAAAGCAGACCATATCATACATGGCAGAGCGTGTGGTTGGTACTGGTTCCTTTGGTGTTGTTTTTCAGGCTAGGTGCCTTGAAACTGGTGAAACAGTTGCCATAAAGAAGGTTTTGCAAGACAAGAGATATAAGAATAGGGAACTACAGGTTATGCGCATGCTTGACCATCCCAATGTTATTCAACTAAAGCACTGTTTCTTTTCAACTACTGAAAAAGATGAGTTGTACCTGAACCTGGTTTTGGAGTATGTATCAGAAACCGTCTACAGAGTTTCTAAGCACTATATCAGAATGCATCAACACATGCCTATAATTTATATACAACTGTATACATACCAGATATGCCGTGCATTAAACTATCTACATCATGTACTCGGCGTCTGCCACCGTGATATCAAACCACAGAATTTATTGGTTAATCCCCATACTCATCAGCTAAAGATCTGTGATTTTGGAAGTGCAAAGATGCTGGTGCCTGGTGAACCCAACATATCATATATATGCTCACGGTATTATAGAGCACCTGAACTCATATTTGGGGCAACTGAATACACAAATGCTATTGATATGTGGTCTGTCGGTTGTGTTATGGCTGAGCTCCTTCTAGGACAGCCAATGTTCCCTGGGGAGAGTGGAGTTGATCAGTTGGTGGAAATCATTAAGATATTGGGGACACCGACCAGAGAAGAAATAAAGTGCATGAATCCAAATTACTCTGAATTCAAGTTTCCTCAGATTAAAGCTCACCCATGGCACAAGGTTTTCCACAAGAGAATGCCTTCAGAAGCTGTTGATCTTGTATCAAGGCTGCTCCAGTATTCACCAAATCTACGGTGCACTGCTCTGGAAGCATGTGCACACCCCTTCTTCAATGATCTAAGAGACCCAAATGTATCCTTGCCGAACGGGCGACCTCTGCCTCCTTTGTTTGACTTTACAGCACAAGAGTTGGCTGGTGCACCTGTTGAGTTGCGTCATCGTCTCATTCCCGAACATGCAGTTAGCCGAATTGATTATCAGAGTCATCAATTACATAAGTAG 1443 0.431 MNMMRRLKSIASGRTSISSDPGGDSNTKRPKFDQETEGRVNEETNPVDRGSTHMEQHVCAPGDTTVGTSNASTVERTEKSGYDQLPKELNEMKIRDEKGNNCNEKDMEPAIVNGNGTETGQVITTAIGGRDGQPKQTISYMAERVVGTGSFGVVFQARCLETGETVAIKKVLQDKRYKNRELQVMRMLDHPNVIQLKHCFFSTTEKDELYLNLVLEYVSETVYRVSKHYIRMHQHMPIIYIQLYTYQICRALNYLHHVLGVCHRDIKPQNLLVNPHTHQLKICDFGSAKMLVPGEPNISYICSRYYRAPELIFGATEYTNAIDMWSVGCVMAELLLGQPMFPGESGVDQLVEIIKILGTPTREEIKCMNPNYSEFKFPQIKAHPWHKVFHKRMPSEAVDLVSRLLQYSPNLRCTALEACAHPFFNDLRDPNVSLPNGRPLPPLFDFTAQELAGAPVELRHRLIPEHAVSRIDYQSHQLHK 480
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele43g0049 480 PANTHER GLYCOGEN SYNTHASE KINASE-3 ALPHA 104 467 - -
Lele43g0049 480 CDD STKc_GSK3 135 427 IPR039192 -
Lele43g0049 480 Gene3D Phosphorylase Kinase; domain 1 125 219 - -
Lele43g0049 480 MobiDBLite consensus disorder prediction 62 79 - -
Lele43g0049 480 MobiDBLite consensus disorder prediction 9 25 - -
Lele43g0049 480 FunFam Glycogen synthase kinase-3 beta 124 219 - -
Lele43g0049 480 Pfam Protein kinase domain 140 424 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele43g0049 480 Gene3D Transferase(Phosphotransferase) domain 1 220 468 - -
Lele43g0049 480 SUPERFAMILY Protein kinase-like (PK-like) 139 450 IPR011009 -
Lele43g0049 480 ProSitePatterns Serine/Threonine protein kinases active-site signature. 261 273 IPR008271 GO:0004672|GO:0006468
Lele43g0049 480 ProSitePatterns Protein kinases ATP-binding region signature. 146 170 IPR017441 GO:0005524
Lele43g0049 480 ProSiteProfiles Protein kinase domain profile. 140 424 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele43g0049 480 SMART serkin_6 140 424 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele43g0049 480 MobiDBLite consensus disorder prediction 26 50 - -
Lele43g0049 480 FunFam Shaggy-related protein kinase kappa 220 468 - -
Lele43g0049 480 MobiDBLite consensus disorder prediction 1 80 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele43g0049 Lele-ChrLele43 802114 806453 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele43g0049 140 466 MAP Kinase Gene Family AT1G73670 36.443 1.76e-56 195
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_GSK Lele43g0049 Pkinase 4.6e-66 CL0016