Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele43g0047 ATGCCCTCTAGTGCAATCTCACAGCCTCGCCTTCTCACTTCCACTCCCACGGCTAAAACCATGTTCAACTCTCCTGGCCTCTCACTTGCCCTTCAAACGGATATAGATGGGCAAAGGGCTGGAAATAGAATGTCTGAGAATTACGGGATGAATGTTAATGGGAGACGAAGCAGAGAAGAAGAGCGAGAAAGCAGATCTGGAAGTGATAACTTGGAAGTCGCTTCCGGCGACGATCAAGACGCCTCCGATCATCCTCCCAGGAAAAAGCGCTATCAACGGCACACCCCTCAACAGATACAAGAGCTTGAAGCTTTGTTCAAGGAGTGCCCTCACCCAGATGAGAAGCAGAGATTGAAACTGAGCAATAGGCTTTGTTTGGAAACGAGGCAAGTGAAATTTTGGTTCCAGAATAGAAGAACTCAGATGAAGACCCAATTGGAGCGCCATGAGAATACACTGCTTAGGCAAGAGAATGACAAGCTTAGAGCTGAGAACATGTCCATTAGGGACGCCATGAGGAACCCCATTTGCTCAAACTGTGGGGGACCAGCTATAATGGGAGAAATTTCACTGGAGGAACAGCATCTTCGGGTCGAAAATGCCCGGTTAAAGGACGAGTTAGACCGGGTTTGTGCCCTCGCCGGCAAGTTCCTTGGCCGCCCAGTATCTTCATATCCCAACTCTATGGCTCCCCCATTGGCAAACTCAAGTTTGGAGCTAGGAGTTGGAAGCAATGGCTTTGGTGGTATAAGCACTGTGCCTGCAACATTGCCCATGGGGCCTGACTTGGGTGTGGGCATTTCTAGCCCTTTAGCTCTGGGAACTCCTCATCCTGCTCCGGCCGCTCGACCAGCCGTGCTTGATAGATCGATGGAGAGGTCCATGTTTCTAGAGCTTGCTTTGGCAGCCATGGATGAGTTGCTGAAGATGGCTCAGACTGATGAGCCTCTGTGGATGAGGAGTTTGGAAGGTGGAAGAGAAATCCTCAGCCATGAGGAGTACTCAAGGACTTTCACGCCTTGCATTGGCTTAAAACCTAACGGCTTTGTGTTTGAAGCCTCAAGGGAGACCGGAATGGTCATCATAAACAGCTTGGCCCTTGTTGAAACTCTGATGGACTCGAATCGTTGGGCAGAGATGTTTCCTTGTATGATCGCAAGAACTTGCACCACCGAAGTAATATCTGGTGGAATAAATGGGACCAAAAATGGTGCTCTTCAACTAATGCATGCTGAGCTGCAAGTTCTATCGCCGTTGGTGCCGGTTCGCGAGGTCAATTTCCTCCGGTTCTGCAAGCAGCATGCTGAGGGAATGTGGGCTATTGTGGATGTGTCCATTGATACTGTCAGGGAAACTTGTAGGCGGCTTCCTTCAGGCTGCCTAGTTCAAGATATGCCTAATGGTTACTCCAAGGTGACATGGGTTGAGCATGCGGAATACGATGAAAGGCAAATTCACGAGCTGTACAGAGGCTTGTTAAGTTCAGGCTTGGCTTTTGGCGCCCAACGCTGGATTGCCACCCTCCAGCGTCAATGCGAATGTGTCACCATTTTAATGTCATCATCACTTCCTTCACGAGACCATTCTGCGATTAATACCGGCGGGCGGCGGAGCATGCTGAAGCTAGCGCAGCGCATGACTAACAACTTTTGCGCCGGTGTTTGTGCCTCGACGGTGCACCAGTGGAACAAGCTCAACGCCGGCGACGTTGGTGAGGATGTCCGGGTCATGACTCGCAAGAGCGTCGACGACCCAGGGGAACCGCCGGGGATCGTGCTGAGCGCTGCCACGTCGGTGTGGCTGCCGGTATCGCCGCAGCGGTTGTTCGATTTCCTCCGTGACGAACGGCTCCGGAGCGAGTGGGACATACTGTCGAACGGTGGGCCCATGCAGGAGATGGCCCACATCGCCAAGGGCCAAGATCATGGCAACTGCGTCTGCTTACTCCGAGCCAGCGCCATGAATTCGAGCCACAGCAGCATGCTAATATTGCAGGAGACGTGCATAGACGCGGCGGGGGCGCTCGTGGTGTACGCGCCGGTGGATATCCCAGCGATGCACTTGGTCATGAACGGTGGCGATTCAGCTTACGTGGCGTTACTCCCGTCGGGGTTCGTGATTGTGCCGGACGGGTCAGGGTCGCGGGGGCCACAAACGCCGGTCGGGAACGGCGGGGCCAGAGCGAGTGGTTCACTCCTAACGGTGGCGTTTCAGATACTGGTGAACAGCCTGCCGACGGCGAAGCTGACGGTAGAGTCAGTGGAGACGGTGAACAACCTGATATCTTGTACGGTGCAAAAGATAAAGGCCGCGCTCCCGTGTGAAAGCTGA 2331 0.5337 MPSSAISQPRLLTSTPTAKTMFNSPGLSLALQTDIDGQRAGNRMSENYGMNVNGRRSREEERESRSGSDNLEVASGDDQDASDHPPRKKRYQRHTPQQIQELEALFKECPHPDEKQRLKLSNRLCLETRQVKFWFQNRRTQMKTQLERHENTLLRQENDKLRAENMSIRDAMRNPICSNCGGPAIMGEISLEEQHLRVENARLKDELDRVCALAGKFLGRPVSSYPNSMAPPLANSSLELGVGSNGFGGISTVPATLPMGPDLGVGISSPLALGTPHPAPAARPAVLDRSMERSMFLELALAAMDELLKMAQTDEPLWMRSLEGGREILSHEEYSRTFTPCIGLKPNGFVFEASRETGMVIINSLALVETLMDSNRWAEMFPCMIARTCTTEVISGGINGTKNGALQLMHAELQVLSPLVPVREVNFLRFCKQHAEGMWAIVDVSIDTVRETCRRLPSGCLVQDMPNGYSKVTWVEHAEYDERQIHELYRGLLSSGLAFGAQRWIATLQRQCECVTILMSSSLPSRDHSAINTGGRRSMLKLAQRMTNNFCAGVCASTVHQWNKLNAGDVGEDVRVMTRKSVDDPGEPPGIVLSAATSVWLPVSPQRLFDFLRDERLRSEWDILSNGGPMQEMAHIAKGQDHGNCVCLLRASAMNSSHSSMLILQETCIDAAGALVVYAPVDIPAMHLVMNGGDSAYVALLPSGFVIVPDGSGSRGPQTPVGNGGARASGSLLTVAFQILVNSLPTAKLTVESVETVNNLISCTVQKIKAALPCES 776
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele43g0047 776 FunFam Homeobox-leucine zipper protein HDG1 75 161 - -
Lele43g0047 776 CDD START_ArGLABRA2_like 293 513 - -
Lele43g0047 776 SUPERFAMILY Bet v1-like 535 762 - -
Lele43g0047 776 Coils Coil 139 171 - -
Lele43g0047 776 MobiDBLite consensus disorder prediction 1 23 - -
Lele43g0047 776 Pfam START domain 298 514 IPR002913 GO:0008289
Lele43g0047 776 MobiDBLite consensus disorder prediction 40 95 - -
Lele43g0047 776 SMART HOX_1 87 149 IPR001356 GO:0003677
Lele43g0047 776 CDD homeodomain 88 145 IPR001356 GO:0003677
Lele43g0047 776 FunFam Homeobox-leucine zipper protein GLABRA 2 298 513 - -
Lele43g0047 776 Pfam Homeodomain 88 143 IPR001356 GO:0003677
Lele43g0047 776 Gene3D - 74 161 - -
Lele43g0047 776 ProSitePatterns 'Homeobox' domain signature. 120 143 IPR017970 GO:0000981|GO:0006355
Lele43g0047 776 ProSiteProfiles 'Homeobox' domain profile. 85 145 IPR001356 GO:0003677
Lele43g0047 776 ProSiteProfiles START domain profile. 289 517 IPR002913 GO:0008289
Lele43g0047 776 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN MERISTEM L1 84 772 IPR042160 -
Lele43g0047 776 SMART START_1 298 514 IPR002913 GO:0008289
Lele43g0047 776 MobiDBLite consensus disorder prediction 53 68 - -
Lele43g0047 776 SUPERFAMILY Homeodomain-like 74 145 IPR009057 -
Lele43g0047 776 SUPERFAMILY Bet v1-like 290 514 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele43g0047 Lele-ChrLele43 789353 794859 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele43g0047 16 776 Homeobox Transcription Factor Family AT3G61150 67.181 0.0 1021
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-HD-ZIP Lele43g0047 START 7.7e-50 CL0209