Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele43g0039 ATGGATAACCGTGGCTCTTCAACGCCATACCGGTATCCCAACCAGTATCCGTACCCTTTATATCAGCCACGTTCAGGTGTAGATCCATATTCACTTCCTCCTCGCTACACATATCCGTTCGGTAATCCTTCACAGCCCTTCAGCTGTGCCCACTATCACCATCCTCGTCCTCCCGGTGCTCCCACTCCACCGCTACCGTCATCCCCTCCTTCTGCTTGTGCAGAACATATTCGACCTCCTCCTATTGCCTATTACACTCCTCTTCCTTACCCTTACCCTCATTATCAACTTGTTCCACCTCCCCATAATGTTACTCCTCCTCAAACTTCCATTTTGCCCCCTTGTAATTTTCAGTTGGCTTCACCTTGTTACCGTTATTTTCCGCCTCCTGAAGAAAGGATCAAAAGGCATTCACGAGCCCTTTCCTACTCTAGTCCATATGAGTCGCCGCGCCAGAGCTCCCCAGGAGGTGGTGGAGAGTCGTCGTTGCAAACCCATGATTCTTCCGACACTCCTCGTTCGTCAGTTTACCGGCAATATTTGGACGGTACTGTGATCAATGCTCGATTTCCCAATAACGGGGAATCTTCTCCCACTAAATGCTCCGCCCAGCCGCCGTTCAGGCATTCGAACTCGGTTTCAATCTCGAACCATGAAGGGCAGTTTTCTGCCCATCGTTGGAACTCATTCTCGGGGCGGGGATCCGCCCACTTTAATGAGTTGGATTCTCATGAAACCATGCGGACTCAGAATCTGGAACTTGTTCCTGCCTCGACTAAAAGGCCCTTGAAAACATTGCTCCTGCATGGGAATTTAGACGTATGGGTTCGAGAAGCGAGAAATCTTCCAAATATAGATTACTTCCACAAGACATTTGCGGGCATGCTGTGTAAATTCCCCGGGAACGTTGAAGGAAAGATTACTATTGATCCTTACGTGATAATATCAATATCAAATGCTATAATTGGGAGGACTTTTGTAATTAACGGCTGTGAAAATCCTAATTGGATGCAACATTTTAATGTTCCCGTTGCACATTATGCTGCTGAAGTTAACTTTCTTGTTAAAGATAATGATATTGTGGGCTCACAGATTATAGGCAATGTGGCGATTCCGGTGGAACAAATTCACTCAGGTGCAGAAGTAGTAGGTACTTACCCTGTCCTGAATTCTTACGGGAGGCCTTATAAGCAGGGCACTACCTTGACCATATCCATACAGTACATTCCAATTGAGAGGCTAAGCCATCATTATCGAGGGATCGATTCAGAGCCCGACTGCACTGGCGTTCCGGGCACATATTTCCCTCTTAGGAAAGGTGGATCTGTCAATCTATACCAAGATGCCCATGTTCCAGATGGTTTACTACCTCTAGTGATGCTTGACCGAGGGAAATATCACGTTCATGGCAAGTGCTGGGCTGACATCTTCAGCGCCATACAGCACGCCCGGCGGTTGATTTATATCACAGGGTGGTCGGTGTGGCATAAGGTTAGGTTGGTAAGGGATGCTGGTTATCAATCAGATTACACCCTCGGAGAGCTTCTCAAGTCAAAGTCACAGGAAGGAGTAAGAGTTCTTCTCCTTATCTGGGATGACCCCACGTCAAGGAAAATCTTGGGTTACAAAACAGATGGTCTAATGGCAACTCATGATGAGGAAACCCGTAGATTTTTCAAACACTCTTCCGTAAAAGTGCTGCTCTGTCCCCGTATTGCAGGAAAACGACATAGCTGGTACAAGCAAAAGGAAGTTGGAACCATATACACACATCATCAGAAAACTATTGTTGTGGATGCGGACGCTGGAAATAACAAAAGAAAAATCATAGCGTTCGTTGGTGGACTTGATTTGTGCGATGGACGATATGATTTCCCCCTCCATCCCCTCTTTAGGACACGCCATTCCCTGCATAAGGATGACTATCACAACCCCACTTTTACGGGTAACACTGGTGGTTGTCCACGGGAGCCATGGCATGACTTGCATTCTAAAGTTGATGGTCCAGCAGCTTATGATGTTCTGACTAACTTTGAGGAGCGGTGGTTAAAAGCTACAAAACCTCAAGGGATTAAAAAGTTGAAATCTTCTTACGATGATGCTCTGCTAAAGCTGGAAAGACTTCCGGAAATTGTTAGCCCTGCTGATATGGCTGTAGATGAAGATGATCCCGATGCTTGGCATGTTCAGATATTTCGGTCAATCGATTCGAATTCTGTTAAGGGATTTCCAAAAGATCCCAAAAATGCAACAAAGAAGAACCTGGTTTGTGGGAAGAATGTATTGATTGACATGAGCATACAAGCAGCATATGTGAAGGCAATTCGTTCGGCACAGCATTACATTTATATAGAGAATCAATATTTCATTGGGTCTTCCTACAACTGGAGTCAATATAAAGACCTAGGTGCCAATAACTTAATCCCAATGGAAATTGCCCTTAAGATTGCTGAAAAGATAAAGGAAAATGAGAGATTTGCGGTGTATATTATCATACCAATGTGGCCAGAGGGCGTTCCTTCCGGGTCTGCCACACAGAGGATTCTATTTTGGCAGCAAAAAACGATGCAAATGATGTATGAGACAGTTTCAAAGGCTTTGGTTGAGGCTGGGCTAGAAGCAGCATTCGCTCCACAGGATTATTTAAACTTTTTTTGCCTCGGAAATCGTGAAATCATAGATATGTATGATTATAGTAGTATGCTCGGAACTCCTCCTCCAGCAAATAGCCCTCAAGCATTTAGTCGAAATAGCCGCCGTTTCATGATTTATGTGCATTCAAAAGGCATGATAGTTGATGATGAATATGTAATACTGGGGTCTGCAAACATCAATCAGCGCTCTATGGAAGGAACAAGGGACACTGAGATTGCGATGGGAGCCTACCAACCTAATTATACTTGGGCGAGACAACGTTCTTATCCACGTGGCGAGGTGCATGGATATAGGATGTCACTCTGGGCTGAACACACAGGAACACTTGAAGAGTGCTTCTTACGGCCAGAGAGCCTTGAATGTGTAAGAAGGATTAGAACAATGGGTGAAATCAACTGGAAGCAATTTGCAGCGAATGAAATAACAGAGATGAGAGGGCACCTTCTGAAATACCCAGTTGAAGTTGATCGAAATGGTAAGGTTAGATCCCTTCCTGGCCACGAAGAATTCCCCGATGTGGGAGGCAGAATAGTTGGATCATTCCTTGCCATCCAAGAGAATCTAACCATTTGA 3228 0.4514 MDNRGSSTPYRYPNQYPYPLYQPRSGVDPYSLPPRYTYPFGNPSQPFSCAHYHHPRPPGAPTPPLPSSPPSACAEHIRPPPIAYYTPLPYPYPHYQLVPPPHNVTPPQTSILPPCNFQLASPCYRYFPPPEERIKRHSRALSYSSPYESPRQSSPGGGGESSLQTHDSSDTPRSSVYRQYLDGTVINARFPNNGESSPTKCSAQPPFRHSNSVSISNHEGQFSAHRWNSFSGRGSAHFNELDSHETMRTQNLELVPASTKRPLKTLLLHGNLDVWVREARNLPNIDYFHKTFAGMLCKFPGNVEGKITIDPYVIISISNAIIGRTFVINGCENPNWMQHFNVPVAHYAAEVNFLVKDNDIVGSQIIGNVAIPVEQIHSGAEVVGTYPVLNSYGRPYKQGTTLTISIQYIPIERLSHHYRGIDSEPDCTGVPGTYFPLRKGGSVNLYQDAHVPDGLLPLVMLDRGKYHVHGKCWADIFSAIQHARRLIYITGWSVWHKVRLVRDAGYQSDYTLGELLKSKSQEGVRVLLLIWDDPTSRKILGYKTDGLMATHDEETRRFFKHSSVKVLLCPRIAGKRHSWYKQKEVGTIYTHHQKTIVVDADAGNNKRKIIAFVGGLDLCDGRYDFPLHPLFRTRHSLHKDDYHNPTFTGNTGGCPREPWHDLHSKVDGPAAYDVLTNFEERWLKATKPQGIKKLKSSYDDALLKLERLPEIVSPADMAVDEDDPDAWHVQIFRSIDSNSVKGFPKDPKNATKKNLVCGKNVLIDMSIQAAYVKAIRSAQHYIYIENQYFIGSSYNWSQYKDLGANNLIPMEIALKIAEKIKENERFAVYIIIPMWPEGVPSGSATQRILFWQQKTMQMMYETVSKALVEAGLEAAFAPQDYLNFFCLGNREIIDMYDYSSMLGTPPPANSPQAFSRNSRRFMIYVHSKGMIVDDEYVILGSANINQRSMEGTRDTEIAMGAYQPNYTWARQRSYPRGEVHGYRMSLWAEHTGTLEECFLRPESLECVRRIRTMGEINWKQFAANEITEMRGHLLKYPVEVDRNGKVRSLPGHEEFPDVGGRIVGSFLAIQENLTI 1075
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele43g0039 1075 Gene3D C2 domain 266 403 IPR035892 -
Lele43g0039 1075 SMART pld_4 587 622 IPR001736 GO:0003824
Lele43g0039 1075 SMART pld_4 921 948 IPR001736 GO:0003824
Lele43g0039 1075 Pfam Phospholipase D C terminal 995 1065 IPR024632 -
Lele43g0039 1075 Pfam Phospholipase D Active site motif 588 622 IPR001736 GO:0003824
Lele43g0039 1075 Pfam Phospholipase D Active site motif 922 948 IPR001736 GO:0003824
Lele43g0039 1075 Gene3D Endonuclease Chain A 464 708 - -
Lele43g0039 1075 PANTHER PHOSPHOLIPASE D 263 1066 IPR015679 -
Lele43g0039 1075 CDD C2_plant_PLD 264 409 - -
Lele43g0039 1075 FunFam Phospholipase D delta 463 701 - -
Lele43g0039 1075 ProSiteProfiles Phospholipase D phosphodiesterase active site profile. 587 622 IPR001736 GO:0003824
Lele43g0039 1075 MobiDBLite consensus disorder prediction 1 25 - -
Lele43g0039 1075 SUPERFAMILY beta-sandwich domain of Sec23/24 12 1024 - -
Lele43g0039 1075 MobiDBLite consensus disorder prediction 49 73 - -
Lele43g0039 1075 SMART C2_3c 271 385 IPR000008 -
Lele43g0039 1075 MobiDBLite consensus disorder prediction 142 175 - -
Lele43g0039 1075 SUPERFAMILY Phospholipase D/nuclease 429 687 - -
Lele43g0039 1075 ProSiteProfiles Phospholipase D phosphodiesterase active site profile. 921 948 IPR001736 GO:0003824
Lele43g0039 1075 SUPERFAMILY Phospholipase D/nuclease 707 1007 - -
Lele43g0039 1075 MobiDBLite consensus disorder prediction 137 175 - -
Lele43g0039 1075 ProSiteProfiles C2 domain profile. 251 386 IPR000008 -
Lele43g0039 1075 Pfam C2 domain 270 388 IPR000008 -
Lele43g0039 1075 Gene3D Endonuclease Chain A 730 975 - -
Lele43g0039 1075 MobiDBLite consensus disorder prediction 56 73 - -
Lele43g0039 1075 FunFam Phospholipase D 734 967 - -
Lele43g0039 1075 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 268 411 IPR035892 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele43g0039 Lele-ChrLele43 717983 723143 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele43g0039 64 1075 Phospholipase D Gene Family (Wang group) AT2G42010 62.725 0.0 1310