Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele43g0008 ATGCCATCACGACCGTATCCTCCCCCTCCTGCGGCGGCGGCGATACCTACGGCCTCACCCTCCCATCACCTCAACCATCACCGCCGCCACCAATCAATCCTCATCGGAGTTATCGGTCTCTCTTTCCTTCTCCTAATCCTCATCGTCTTTCTCATAGTCTTCCTCTACCGCAAGCTCTCTTATAACCGAACGGCGCCATTCGACCACTGTAACCACAGTCACCAGCATCGCCGTTTCTCCTATTCTCTCCTTCGACGCGTCACCAACTCCTTCTCGGCGTCCACCAAGCTCGGCCATGGTGGGTTCGGCTCCGTTCACAAGGCTACACTGCCTTCCGGTCTGTCCGTGGCTCTTAAACTCATGGACTCCCCGGGGTCGCTTCAAGGTGAGCGCGAGTTTCACAATGAGCTTTCGCTCTGTTCCCAGCTTAGTTCTCCTTACATACTCTCTCTTCTGGGTTACTCTTCTGATCGCCGAGGCCGCAAGCTGATTTTGGTTTATGAACTCATGCCGAATCGGAGCTTGCAAGATGCGTTGCTGGATAGGAAGTGCGAAGAGCTTATGGAGTGGAAGAAGAGATTCGATGTTGCTGTTCACATCTCGAAGGGTCTTGAGTACCTTCACCATCATTGTAATCCGCCCGTGATTCACGGGGATATTAAGCCGAGTAACGTGTTGCTGGATGCCGGTTTCTCGGCGAAAATTGGGGATTTTGGACTTGCTAGGTTGAAAACAGAGGATCTGGAAATGGTGGACGAAAATGGGGGGGAAGAAGAGGGCGCGAAGAAGAAGGATAGGGTTGCGGACTTGGGGGATGACCACGGGTCGATTTTGGAGGAGGCGGAGAGCGTCACCACTGGGTTTGAAGAAGGTAGTGCAATGGTCGATCGGTCGCCAGAGAGTTGCTTGATTACGATTTTGGATTCAGAAGCTTCTCCGGAGACGACGGTAGCGCTGTCGCCAGAGGTGGGGGTTGATAAATCAAGTGTCTCAGAAGGGTGCTTTGATAAATTTAGTATTGACAGTGGAAAAGATTTGATCTGTAATAGTCGGAAGAAGGGTGGTTCGGGCAGGGATTGGTGGTGGAAGCAGGACAATGGGGGAGGGTCGGAATCAGGCAGGGTGAAAGACTATGTGATGGAGTGGATCGGGAGTGAGATTAAGAAGGAAAGACCAAAAAGCGAATGGATTGCGTCTCCAAGCACCACAGGGACTAGCACTCCGGCCCAGAAAATCGAGTCAAAGAAGCAGAAAAAGAGATTGGATTGGTGGGCATCACTAGATGAAGAAAAAGTCAAGAAGAAGGAGAAGAACCGAAAACCCAGAGAATGGTGGAAGGAGGAGTTCTGTGAGGAGCTCACGAAAAAGAAAAAAAGAAGTCTAGATTCGAATTACGCTGGGGAATCATGGTGGCAGAAAGATGATGAAATTGTATCAGAGAAGAAAAAGAAGAAGAGGAAAAGCAAGAGTAGCAGGGGAAGCATTGACTGGTGGTTGGATGGTTTGAGCGGTGAGCTCAGAAATGGCAGAAGAAATAGCCAGGATTGGGTTAGCGGGGATATACCCAAGAGCGGTGGAATTAGCAGCACACCAAGTATGAGAGGCACTGTTTGTTACATTGCGCCTGAGTATGGTGGTGGTGGACAGCTTTCTGAGAAATGTGATGTCTACAGTTTTGGAGTTCTGCTCTTGGTTTTGATAGCAGGAAGACGACCTCTTCAAGTTACAGCATCACCAATGTCAGAGTTTGAAAGGGCTAATCTCATTTCATGGGCTCGGCAACTTGCCCACAGTGGGAGGCTTTTGGATCTTATAGACCCTTCTATTCATTCATTAGACAAGGAGCAGGCATTGCTCTGCATCACCATTGCCTTGTTATGTCTACAGAGATCCCCAGCAAAGCGACCTACCATGAAAGAGATTGTAGGCATGCTTTCCGGTGAGGCTGAGCCGCCTCACTTACCTTTTGAGTTTTCGCCATCACCGCCATCCAATTTTCCATTCAAGTCCCGAAAGAAGGCTCGGTGA 2028 0.499 MPSRPYPPPPAAAAIPTASPSHHLNHHRRHQSILIGVIGLSFLLLILIVFLIVFLYRKLSYNRTAPFDHCNHSHQHRRFSYSLLRRVTNSFSASTKLGHGGFGSVHKATLPSGLSVALKLMDSPGSLQGEREFHNELSLCSQLSSPYILSLLGYSSDRRGRKLILVYELMPNRSLQDALLDRKCEELMEWKKRFDVAVHISKGLEYLHHHCNPPVIHGDIKPSNVLLDAGFSAKIGDFGLARLKTEDLEMVDENGGEEEGAKKKDRVADLGDDHGSILEEAESVTTGFEEGSAMVDRSPESCLITILDSEASPETTVALSPEVGVDKSSVSEGCFDKFSIDSGKDLICNSRKKGGSGRDWWWKQDNGGGSESGRVKDYVMEWIGSEIKKERPKSEWIASPSTTGTSTPAQKIESKKQKKRLDWWASLDEEKVKKKEKNRKPREWWKEEFCEELTKKKKRSLDSNYAGESWWQKDDEIVSEKKKKKRKSKSSRGSIDWWLDGLSGELRNGRRNSQDWVSGDIPKSGGISSTPSMRGTVCYIAPEYGGGGQLSEKCDVYSFGVLLLVLIAGRRPLQVTASPMSEFERANLISWARQLAHSGRLLDLIDPSIHSLDKEQALLCITIALLCLQRSPAKRPTMKEIVGMLSGEAEPPHLPFEFSPSPPSNFPFKSRKKAR 675
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele43g0008 675 MobiDBLite consensus disorder prediction 1 15 - -
Lele43g0008 675 ProSiteProfiles Protein kinase domain profile. 91 656 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele43g0008 675 PANTHER OS07G0586332 PROTEIN 1 675 IPR044576 -
Lele43g0008 675 Gene3D Phosphorylase Kinase; domain 1 62 169 - -
Lele43g0008 675 MobiDBLite consensus disorder prediction 653 675 - -
Lele43g0008 675 MobiDBLite consensus disorder prediction 1 23 - -
Lele43g0008 675 FunFam Os07g0541700 protein 170 255 - -
Lele43g0008 675 Pfam Protein kinase domain 530 642 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele43g0008 675 ProSitePatterns Serine/Threonine protein kinases active-site signature. 215 227 IPR008271 GO:0004672|GO:0006468
Lele43g0008 675 ProSitePatterns Protein kinases ATP-binding region signature. 97 119 IPR017441 GO:0005524
Lele43g0008 675 Pfam Protein tyrosine and serine/threonine kinase 94 253 IPR001245 GO:0004672|GO:0006468
Lele43g0008 675 MobiDBLite consensus disorder prediction 393 417 - -
Lele43g0008 675 MobiDBLite consensus disorder prediction 396 411 - -
Lele43g0008 675 SUPERFAMILY Protein kinase-like (PK-like) 67 664 IPR011009 -
Lele43g0008 675 Gene3D Transferase(Phosphotransferase) domain 1 501 651 - -
Lele43g0008 675 Gene3D Transferase(Phosphotransferase) domain 1 170 269 - -
Lele43g0008 675 SMART serkin_6 91 645 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele43g0008 Lele-ChrLele43 542918 544945 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele43g0008 523 642 Receptor kinase-like Gene Family AT3G58690 37.302 2.78e-15 76.6
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-XI Lele43g0008 PK_Tyr_Ser-Thr 2.6e-26 CL0016