Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele42g1342 ATGCCATCACGACCGTCTCCACCACCTCCTGCGGCGGCGGCGATACCTACGTCCTCACCCTCCCCTCACCGCCGCCACCAATCAATCCTCATCGGAGTTATCGGTCTCGCTTTCCTTCTCCTAATCCTCATCGTCTTCCTCATAGTCTTCCTCTACCGCAAACTCTCTTATAACCGAACAGCACCATTCGACCACTATAACCACAATCAACAGCATCGTCGTTTCTCCTACTCTCTCATTCGACGCGTCACCAATTCCTTCTCGGCGTCCACCAAGCTCGGCCATGGTGGGTTCGGCTCCGTTCACAAGGCTAACCTGCCTTCCGGTCTGTCCGTGGCTCTTAAACTTATGGACTCCCCGGGGTCGCTTCAAGGCGAGCGCGAGTTTCACAACGAGCTTTCGCTCTGTTCCCAGCTTAGTTCTCCTTACATACTCTCTCTTCTGGGTTACTCTTCTGATCGCCGAGGCCGAAAACTGATTTTGGTTTATGAACTCATGCCGAATCGGAGTTTGCAAGATGCGTTGCTGGATAGGAAGTGCGAGGAGCTTATGGAGTGGAAGAAGAGATTCGATGTTGCTGTTCACATCTCGAAGGGTCTTGAGTACCTTCACCATCATTGTAATCCGCCCGTGATTCACGGGGATATTAAGCCGAGTAACGTGTTGCTGGATGCCGATTTTTCGGCGAAAATTGGGGATTTTGGGCTTGCTAGGTTGAAAACAGAGGATCTGGAAATGGTGGAGGAAAATGGGGGGGAAGAAGAGGGCATGAAGAAGAAGGATGGTGTTGCAGACTTGGGGGATGACCATGGGTCGATTTTGGAAGAGGCGGAGAGCGTCACCACTGGGTTTGAAGAAGGTAGTGCAGTGCTCGATCGGTCGCCAGAGAGTTGCTTGATTAGGATTGTGGATTCAGAAGCTTCTCCGGAGACGACGGTAACGCTGTCGCCAGAGGTGGGGGTCGATAAATTAAGTGTCTCAGAAGGGTGCTTTGATAAATTTAGCATTTACAGTGGAAAAGATTTGATCTGTAATAGTCGGAAGAAGGTTGGTTCGGGAAGGGACTGGTGGTGGAAGCAGGACAATGGAGGAGGGTCGGAATCGGGCAGGGTGAAAGACTATGTTATGGAGTGGATCGGGAGTGAGATTAAGAAGGAAAGACCAAAAAGCGAATGGATCGCGTCTCCAAGCACCGCAGGGACTAGCACTCCAGCCCAGAAAATCGAGTCAAAGAAGCAGAAAAAGGGATTGGATTGGTGGGCATCACTAGATGAAGAAAAAGTCAAGAAGAAGGAGAAGAACCGAAAACCCAGAGAATGGTGGAAGGAGGAGTTCTGTGAGGAGCTCACGAAGAAGAAAAAGAGAAGTCTAGATTCGAATTACGTTGGAGAAGCATGGTGGCAGAAAGATGATGAAATGGTATCAGAGAAGAAGAAGAAGAAGAGGAGGAAAAGCAAGAGTAGCAGAGGAAGCATTGACTGGTGGTTGGATGGTTTGAGCGGTGAGCTCAGAAATGGCAGAAGAAATAGCCAGGATTGGGTTAGTGGGGATATACCCAAGAGCGGTGGAATTAGCAGCACGCCAAGTATGAGAGGAACTGTTTGTTACATTGCTCCTGAGTATGGTGGTGGTGGACAGCTTTCTGAGAAATGTGATGTCTATAGTTTTGGAGTTCTGCTCTTGGTTTTGATAGCAGGAAGACGACCCCTTCAAGTTACAGCATCACCAATGTCAGAGTTTGAAAGGGCTAATCTCATTTCATGGGCTCGGCAACTTGCCCACAGCGGGAGGCTTTTGGATCTTATAGACCCTTCCATTCATTCATTAGACAAGGAGCAGGCATTGCTCTGCATCACCATTGCCTTGTTATGTCTACAGAGATCCCCAGCAAAGCGACCTACCATGAAAGAGATTGTAGGCATGCTTTCTGGTGAGGCTGAGCCGCCTCACTTACCTTTTGAGTTTTCGCCATCACCGCCATCCAATTTTCCATTCAAGTCTCGAAAGGAGGCTCGGTGA 2019 0.4938 MPSRPSPPPPAAAAIPTSSPSPHRRHQSILIGVIGLAFLLLILIVFLIVFLYRKLSYNRTAPFDHYNHNQQHRRFSYSLIRRVTNSFSASTKLGHGGFGSVHKANLPSGLSVALKLMDSPGSLQGEREFHNELSLCSQLSSPYILSLLGYSSDRRGRKLILVYELMPNRSLQDALLDRKCEELMEWKKRFDVAVHISKGLEYLHHHCNPPVIHGDIKPSNVLLDADFSAKIGDFGLARLKTEDLEMVEENGGEEEGMKKKDGVADLGDDHGSILEEAESVTTGFEEGSAVLDRSPESCLIRIVDSEASPETTVTLSPEVGVDKLSVSEGCFDKFSIYSGKDLICNSRKKVGSGRDWWWKQDNGGGSESGRVKDYVMEWIGSEIKKERPKSEWIASPSTAGTSTPAQKIESKKQKKGLDWWASLDEEKVKKKEKNRKPREWWKEEFCEELTKKKKRSLDSNYVGEAWWQKDDEMVSEKKKKKRRKSKSSRGSIDWWLDGLSGELRNGRRNSQDWVSGDIPKSGGISSTPSMRGTVCYIAPEYGGGGQLSEKCDVYSFGVLLLVLIAGRRPLQVTASPMSEFERANLISWARQLAHSGRLLDLIDPSIHSLDKEQALLCITIALLCLQRSPAKRPTMKEIVGMLSGEAEPPHLPFEFSPSPPSNFPFKSRKEAR 672
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele42g1342 672 PANTHER OS07G0586332 PROTEIN 1 671 IPR044576 -
Lele42g1342 672 SMART serkin_6 87 642 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele42g1342 672 ProSitePatterns Serine/Threonine protein kinases active-site signature. 211 223 IPR008271 GO:0004672|GO:0006468
Lele42g1342 672 ProSitePatterns Protein kinases ATP-binding region signature. 93 115 IPR017441 GO:0005524
Lele42g1342 672 Pfam Protein kinase domain 527 639 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele42g1342 672 MobiDBLite consensus disorder prediction 1 23 - -
Lele42g1342 672 ProSiteProfiles Protein kinase domain profile. 87 653 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele42g1342 672 MobiDBLite consensus disorder prediction 650 672 - -
Lele42g1342 672 MobiDBLite consensus disorder prediction 1 16 - -
Lele42g1342 672 MobiDBLite consensus disorder prediction 389 413 - -
Lele42g1342 672 Gene3D Transferase(Phosphotransferase) domain 1 498 648 - -
Lele42g1342 672 Gene3D Transferase(Phosphotransferase) domain 1 166 263 - -
Lele42g1342 672 Gene3D Phosphorylase Kinase; domain 1 58 165 - -
Lele42g1342 672 SUPERFAMILY Protein kinase-like (PK-like) 62 661 IPR011009 -
Lele42g1342 672 Pfam Protein tyrosine and serine/threonine kinase 90 250 IPR001245 GO:0004672|GO:0006468
Lele42g1342 672 FunFam Os07g0541700 protein 166 251 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele42g1342 Lele-ChrLele42 25221703 25223721 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele42g1342 520 642 Receptor kinase-like Gene Family AT3G58690 37.209 2.96e-15 76.6
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-XI Lele42g1342 Pkinase 2.8e-26 CL0016