Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele42g1333 ATGCCTAACATTTCAAGGGTATTTTTGGAATTTGAGTTGAAATTTCCGCCGACGGCTTCTTCCTTGGACGGCATTGTTAACCAAAGGACTCGTGGGACATCTCAGTTCTGGCAGTTCGGGTTTCCTGATTCTTCGTCGCTAACAATAACCATGGTGGTTGAAGATAATAATCATGACGAGGTTCGTTCAACAGAAGAATGGTTGATTCAAGCACAAGAGCTTGTCCCTCTAGCTCTTGAGAAGGCCAAGGAGGTGAAGAATTTCCCAGGAAGGTGGAAGATGATCATATCAAAACTCGAACAGATCCCGGGCCGTTTATCGGACTTATCGAGCCATCCATGCTTCTCCAAGAACGCTCTCTGCAAGGAGCAATTGCAGGCCGTATCATCAATACTCAGAGAAGCCATTCATTTGGCTGACCTTTGCGTGAAGAAGAAGTACGAAGGCAAGCTGAAGATGCAGAGTGATCTCGATGCCTTATCAGGAAAACTCGATTTGCACCTGAAAGATTGCAGCCTGCTGATCAAAACTGGAGTTCTTGGGGAGGCCACTTTGCCATTAGCAATATCGTCAGAAGCTGATGTTTCGAATAATATCAGGGAGTTACTGGCTCGCCTGCAGATCGGCCACTTGGAGGCGAAACACAGGGCTATAGAGAAACTACACGATGTGATGAAAGAAGATGAGAAGAGTGTTGTAGCTGTTTTAACACGTAGCAACATAGCTGCTTTGGTTCAATTGCTCGCTGCTAGTTCTCCAAGGATAAGGGAGAAAACTGTTTCCATTCTATGCAGTCTTGCAGAATCAGGAAGCTGTGAGAATTGGTTAGTTTCTGAAGGAGTAATTCCACCTCTGATAAGGCTCATTGAATCAGGAAGTGCCATCGCGAAAGAGAAGGCTACCATAACCTTTCAGAGGCTCTCCATGTCATCAGAAACTGCTCGTGCCATTGTTGGACATGGCGGGGTTCGTCCACTCATTGATCTCTGTCAGACTGGTGACTCTGTGTCCCAGGCTGCTTGTGCTTGTACTCTGAAGAACATATCTGCTGTCCCCGAGGTTCGACAAGTTCTAGCCGAGGAAGGGATTGTTAAGGTAATGATCAGTCTCCTTAACTGTGGGATGTTATTGAATTCCAAAGAGTATGCAGCTGAGTGCCTACAGAATCTCACTTCAAGCAATGAGAATCTAAGAAGGCTAGTCATATCAGAAAATGGAATAAGAAGCCTTTTAGCTTATTTAGACGTTCCTCTTCCGCAAGAATCTTCAATGGGAGCCCTGAGGAACTTAGTAGGATCTGTCTCTGAACAATCTCTAGTTTCCATGGGTCTGCTTCCTCGCTTGGCTCATGTCCTAAAATCTGGGTCTATCGGGGCCCAGCAAGCGGCTGCTTCTACAATCTGTAAAATTTGCAGCTCAGGAGAGATGAAGAAGATGATAGGTGAGGCTGGGTGCGTGCCTCTGCTTGTGAAAATGCTGGAGGCCAAGTCTAATGGTGCTAGAGAGGTGGCTGCACAGGCGATTTCGAGCTTGATGATGCTGTCTCAGAATCAAAGAGAGGTGAAGAGGAATGACAAGAGCGTGCCTAATCTTGTTCAGTTGCTCGATCCAAATCCTCAAAACACTGCGAAGAAATATGCAGTGGCATGCCTTGGATCGCTATCTTCGAGTCAAAAGTGTAGGAAACTGATGATCTCCTACGGAGCAATCGGCTATCTGAAGAAGCTGACTGAGATGGAGATTCCGGGAGCGAAGAAGCTACTTGAGAGATTGGGAAGGGGGAAATTGAGAAGCTTGTTTAGCAGGAAATAG 1812 0.4625 MPNISRVFLEFELKFPPTASSLDGIVNQRTRGTSQFWQFGFPDSSSLTITMVVEDNNHDEVRSTEEWLIQAQELVPLALEKAKEVKNFPGRWKMIISKLEQIPGRLSDLSSHPCFSKNALCKEQLQAVSSILREAIHLADLCVKKKYEGKLKMQSDLDALSGKLDLHLKDCSLLIKTGVLGEATLPLAISSEADVSNNIRELLARLQIGHLEAKHRAIEKLHDVMKEDEKSVVAVLTRSNIAALVQLLAASSPRIREKTVSILCSLAESGSCENWLVSEGVIPPLIRLIESGSAIAKEKATITFQRLSMSSETARAIVGHGGVRPLIDLCQTGDSVSQAACACTLKNISAVPEVRQVLAEEGIVKVMISLLNCGMLLNSKEYAAECLQNLTSSNENLRRLVISENGIRSLLAYLDVPLPQESSMGALRNLVGSVSEQSLVSMGLLPRLAHVLKSGSIGAQQAAASTICKICSSGEMKKMIGEAGCVPLLVKMLEAKSNGAREVAAQAISSLMMLSQNQREVKRNDKSVPNLVQLLDPNPQNTAKKYAVACLGSLSSSQKCRKLMISYGAIGYLKKLTEMEIPGAKKLLERLGRGKLRSLFSRK 603
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele42g1333 603 Pfam Armadillo/beta-catenin-like repeat 475 511 IPR000225 GO:0005515
Lele42g1333 603 Pfam Armadillo/beta-catenin-like repeat 311 350 IPR000225 GO:0005515
Lele42g1333 603 Gene3D - 187 436 IPR011989 -
Lele42g1333 603 Gene3D - 437 589 IPR011989 -
Lele42g1333 603 SUPERFAMILY ARM repeat 197 582 IPR016024 -
Lele42g1333 603 SMART arm_5 228 268 IPR000225 GO:0005515
Lele42g1333 603 SMART arm_5 393 432 IPR000225 GO:0005515
Lele42g1333 603 SMART arm_5 310 350 IPR000225 GO:0005515
Lele42g1333 603 SMART arm_5 433 472 IPR000225 GO:0005515
Lele42g1333 603 SMART arm_5 351 392 IPR000225 GO:0005515
Lele42g1333 603 SMART arm_5 473 513 IPR000225 GO:0005515
Lele42g1333 603 SMART arm_5 515 556 IPR000225 GO:0005515
Lele42g1333 603 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 280 322 IPR000225 GO:0005515
Lele42g1333 603 PANTHER ARM REPEAT SUPERFAMILY PROTEIN 55 601 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele42g1333 Lele-ChrLele42 25154143 25156320 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele42g1333 353 579 U-box Gene Family AT2G23140 28.448 3.77e-09 57.8