Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele42g1322 ATGTCAAAGTTGACCAAGCGCACAGTGACAATTTTGTTATTGTTTCTGTTAAACCCTTTTCGAAGTCCGACGCTTTTGCAAAAACTTAACAAACCTACGTTCCCACTTTCGGTCACCATGGCGAGCTCAGATGAAGCAAAGCTCGAAGCGTTCCTCCAGTGGCTACAGGCGAATGGAGTTCAACTGCAAGGTTGCAACATCAAGTATTGTGATTCCAGAAAAGGGTTTGGCATCTTTTCAACTGAAAATGTTTCCGATGGGGTTCTACTAGTTGTTCCGCTAGATTTAGCGATTACTCCAATGAGGGTATTGCAAGATCCTCTTCTTGGCCCAGAATGCAGGGCAATGTTCGAAGAAGGAGAAGTAGATGACAGGTTCTTGATGATTTTGTTCTTGACTGTGGAGCACTTGCGTCATAATTCCTCATGGAAGCCGTACCTTGACATGCTTCCAGCCAATTTCAGAAATCCACTTTGGTTTAGTGATGATGATCTTCAAGAGCTGAGGGGAACAACGTTGTTCCGTGCTACTGAATTGCAGAAGAAAAACTTGCTGTCGTTGTATGAGACCAAAGTAAAGGCTTTGGTGAAGAAGCTCTTGACTCTTAATGGATGTTCAGAGATTGAGGTGTGCTTTGAAGATTTCCTTTGGGCAAATTCAGTATTCTGGAGTCGTGCTTTGAACATCCCTTTTCCTCATTCTTTTGTATTTCCAAAAATGCAAACACCTGACAGTTGCATTTCAGTCAATGGAAGTGTCAAGACTTCAATAAATGAAAGCCAGGTTGAAAAATCTGATGAGGAAGTCAATGACAGGGCCTGTGACAAAATACAGGGAGACCCAGTTTGGGTGGAGGGTCTCGTCCCGGGCATTGACTTTTGCAACCATGATCTGAAGCCAATAGCAACTTGGGAAATCGATGGAACTGGATCAATCACACATGTTCCTTCTTCCATGTACCTTCTCTCTGGTGCACAAAATCCGTTGGAGATTGGTCAAGAAATTTCCATTAGTTATGGCAACAAAGGAAATGAGGAACTTCTCTATCTGTATGGTTTTGTGATCGATGATAACCCTGATGACTATCTCATGGTCCACTATCCAGCAGAAGCAATTGCTTCTATATCTTGCTCAGAGGCCAAAAATCAGCTTCTTGAAGCCCAGAAGGCTGAGATGAGATGTCTTTTACCCAAGACTTTGCTGGATCATGGGTTTTTTCCAGTAGGCACCAAAAAAGGTAGGGGAAATGACAAGTGCAAGGTGGACCAAGTTTGCAATTATAGTTGGAGTGGTCAACGGAAGACGCCATCTTATGCAAATAAGCTGGTTTTTCCCGAGAAGTTTATGACAGCCTTGAGGACCATTGCCATGCAGGAGAATGAGATCTTTAAAGTTTCCTCACTGCTTGAAGAGCTTGTTGGATCTGGAGGGGGGAGAGAACTATCAGATACGGATGTTCAATCAGCAGTATGGGAGGTTTGTGGTGATTCTGGAGCATTCCAATTGCTTGTTGATCTTCTTCAAGTTAAGTTAATGGATCTTGAAGAGGGTTCTGGAACTGAGGAAAGCGAAACTGATTTGCTGAACAAGGCCCTTATTATGGATAGCCCGGATGATAACCAACAGTCGAAGAATAGTTCGAGCAACAGCAATGAGACTGAGGAGCACAAGTTTATGAGTAGAAACAGATGGTCCGCTATAGTATATCGGCGAGGGCAGAAGCAACTCACTCTCTTATTCTTGAAAGAAGCAGAACACGCTCTGCAATTATCCTTAGATGAAGAAGAGAGATAG 1794 0.4326 MSKLTKRTVTILLLFLLNPFRSPTLLQKLNKPTFPLSVTMASSDEAKLEAFLQWLQANGVQLQGCNIKYCDSRKGFGIFSTENVSDGVLLVVPLDLAITPMRVLQDPLLGPECRAMFEEGEVDDRFLMILFLTVEHLRHNSSWKPYLDMLPANFRNPLWFSDDDLQELRGTTLFRATELQKKNLLSLYETKVKALVKKLLTLNGCSEIEVCFEDFLWANSVFWSRALNIPFPHSFVFPKMQTPDSCISVNGSVKTSINESQVEKSDEEVNDRACDKIQGDPVWVEGLVPGIDFCNHDLKPIATWEIDGTGSITHVPSSMYLLSGAQNPLEIGQEISISYGNKGNEELLYLYGFVIDDNPDDYLMVHYPAEAIASISCSEAKNQLLEAQKAEMRCLLPKTLLDHGFFPVGTKKGRGNDKCKVDQVCNYSWSGQRKTPSYANKLVFPEKFMTALRTIAMQENEIFKVSSLLEELVGSGGGRELSDTDVQSAVWEVCGDSGAFQLLVDLLQVKLMDLEEGSGTEESETDLLNKALIMDSPDDNQQSKNSSSNSNETEEHKFMSRNRWSAIVYRRGQKQLTLLFLKEAEHALQLSLDEEER 597
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele42g1322 597 MobiDBLite consensus disorder prediction 535 549 - -
Lele42g1322 597 Pfam SET domain 75 340 IPR001214 GO:0005515
Lele42g1322 597 Gene3D set domain protein methyltransferase, domain 1 44 354 - -
Lele42g1322 597 SUPERFAMILY SET domain 47 358 IPR046341 -
Lele42g1322 597 MobiDBLite consensus disorder prediction 535 557 - -
Lele42g1322 597 CDD SET_LSMT 71 354 - -
Lele42g1322 597 PANTHER UNCHARACTERIZED PUTATIVE METHYLTRANSFERASE 46 529 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele42g1322 Lele-ChrLele42 25079856 25086916 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele42g1322 40 395 NAC Transcription Factor Family AT3G56570 25.450 8.95e-07 50.1
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SET Lele42g1322 SET 1.7e-10 No_clan