Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele42g1312 ATGCTCTGGAGTGACTGTCTCAAACTTCTTTTCATCATTACTAAAACCTTGGAACGGTACCAGAAGTGCACTTTTACTTCTCAAGACACCAATGTTCTTGAGCTTGAAACCCAGAGCTGGTGCCAAGAGGTGTCAAATCTAAAGGCAAAGTATGAGTCTCTTCAGAGGACTCAAAGGCATTTGCTCGGGGAAGATCTGGGACCACTGAATGTGAAAGAGCTTCAGAGTCTAGAGAAGCAGCTTGAAGGAGCTCTAGCTCAAGCCAGGCAAAGGAAGACAGAGATCATGATGGAACAGATGGAAGATCTACGCAGAAAGGAACGCCACCTGGGAGACATGAATCAGCAACTGAGACTGAAGGTGGAAGCAGAGGGATATAATGTGAAGAGCATAGAGAGCATATGGAGCAGACATTGTGAGTCATCAGCTGCCAATCCCAACTTTGCCTTGCCACCTTCCCATAACCCATTCCTGCATATTGGGTACAACCATCATCAGTATGTGGAAGCTGCAGAGACATCTAATCATAATGCTTCCAATAGGGCCAATAACATGCTAGCTGAGACTAACTTGATGCAGGGCTGGCTTCTTTGA 594 0.4596 MLWSDCLKLLFIITKTLERYQKCTFTSQDTNVLELETQSWCQEVSNLKAKYESLQRTQRHLLGEDLGPLNVKELQSLEKQLEGALAQARQRKTEIMMEQMEDLRRKERHLGDMNQQLRLKVEAEGYNVKSIESIWSRHCESSAANPNFALPPSHNPFLHIGYNHHQYVEAAETSNHNASNRANNMLAETNLMQGWLL 197
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele42g1312 197 Coils Coil 168 188 - -
Lele42g1312 197 Coils Coil 71 94 - -
Lele42g1312 197 ProSiteProfiles K-box domain profile. 37 127 IPR002487 GO:0003700|GO:0005634|GO:0006355
Lele42g1312 197 Pfam K-box region 36 121 IPR002487 GO:0003700|GO:0005634|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele42g1312 Lele-ChrLele42 24987073 24989624 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele42g1312 13 197 MADS-box Gene Family AT2G45650 50.510 2.07e-64 197