Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele42g1305 ATGATAAGTACAGCATCGTTGCCGTCAGCTCTACCAGATTCCTCCGTAGACCCCTCGCCCCTTCTTCGTTACTCCGTCTCCGATCAAGTGCTCCGACGGACGTCGGGGCCAATACGGAGCGCGACGCGGTTCTTCCGGCATGCGAGCGGGCGGCGGATGATGCTCCGGGAGCCGTCGGTGCGGGTGCGGGAGAACGCGGCGGAGCAGCTGGAGGCGCGTCAGAGTAACTGGGCGTTCTCGAAGCCGGTGGTGATACTGGATGTCGTTTGGAACTTGGCGTTTGTGATTAGCGGGATTGTCGTTTTGGGGCTGAGCGTTGAGGAGAAGCCTTCGGTGCCTTTGAGGGTGTGGATTTGTGGGTACTTGCTTCAAGGTGCGTTTCACTGTGTGCGTGTTACTCTTAAGTACAGACGATACATGCAAGCCCAAGTTCGTTCTGCTTCCGAAGAACAGTATCAGAATGGGATTTCTTGGGAAAGAGGTGTAGATTTCAATTCTAGCTCTGGGAGTGATATTGGCGATGCGAATGATTCTGCTGACGAACAGGATCAGGAAGGATATAGAAAGCGCATGGAATCTGCAAATACTCTGTTTGCATTCATATGGTGGCTTCTTGGATTTTATTGGATTACTACTGGTGGCCAGAGTTTGACCCAAGATGCCCCTCAGCTTTACTGGCTTTGTATCACCTTCCTTGCTATCGACATTGTAATTGTTTTGATCTCTGTGGTTGCGGCATGCCTTGTTGGCATTGCTGTTTGCTGCTGTCTGCCCTGCATACTTGCATTTTTGTCAGTTCTGGCGGATAAGGAAGGGGCAACCGAGGAAGAAATCAATGGGTTGCCGAAATACAAGTTCAGGAGGGCAGATGAACATAAGCTTAATGTTGATGGTGATGATGCCCAAGCCTCATCTTGTAAAGGAATAATGACGGAATGTGACAGCGATACACCTGCAGAACATGTTCTTTCAACAGAAGATGCGGAGTGCTGCATCTGCTTGTGTCCATATGAGGATGGAGCAGAGCTAAGAGAACTTCCCTGTAGCCACCATTTTCACGCGGAATGCATCGACAAGTGGTTGCACATCAACGCGAACTGCCCTCTCTGCAAGTTCAATGTTCATACGGGAAACCATTCACAAGTTTGA 1149 0.503 MISTASLPSALPDSSVDPSPLLRYSVSDQVLRRTSGPIRSATRFFRHASGRRMMLREPSVRVRENAAEQLEARQSNWAFSKPVVILDVVWNLAFVISGIVVLGLSVEEKPSVPLRVWICGYLLQGAFHCVRVTLKYRRYMQAQVRSASEEQYQNGISWERGVDFNSSSGSDIGDANDSADEQDQEGYRKRMESANTLFAFIWWLLGFYWITTGGQSLTQDAPQLYWLCITFLAIDIVIVLISVVAACLVGIAVCCCLPCILAFLSVLADKEGATEEEINGLPKYKFRRADEHKLNVDGDDAQASSCKGIMTECDSDTPAEHVLSTEDAECCICLCPYEDGAELRELPCSHHFHAECIDKWLHINANCPLCKFNVHTGNHSQV 382
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele42g1305 382 SMART ring_2 330 370 IPR001841 -
Lele42g1305 382 Pfam Ring finger domain 329 371 IPR001841 -
Lele42g1305 382 PANTHER TARGET OF ERK KINASE MPK-1 49 377 - -
Lele42g1305 382 SUPERFAMILY RING/U-box 322 376 - -
Lele42g1305 382 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 308 377 IPR013083 -
Lele42g1305 382 CDD RING-H2_RNF111_like 329 373 - -
Lele42g1305 382 ProSiteProfiles Zinc finger RING-type profile. 330 371 IPR001841 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele42g1305 Lele-ChrLele42 24929277 24931932 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele42g1305 12 381 C3H Transcription Factor Family AT1G68070 44.297 3.04e-103 306