Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele42g1287 ATGGAGATTCCTTATCTAAACCGCCTGGCCCAGCATTCCTCTTGGACAAGAATGTACACTAGCACGAGGACTCAACCTTATCATATTGCAAAGGTTTTCTTTTGTCAGGCAAAAAATGATGGGTCATTAAAGTTGGTGCCTCCAACCCTGTTAGTAGCAGAAAAGGAAGAAGCAAAGGCTGTATTAACCTTGTTTTTGAAGAAACAAGGCTTGAGTAATGCAGTTGCAGCAAGAACCATCAACAAGTCAGATGTTTTCATCGACCACCTTATATCAAAGATTCACTCTAAACATAAATCTCGGTACCTAGTAGGAAGAGAACTTACAACCCTTGAGATTAGAGATGCTTTGATTCCATATCTTGAATCCCTTTTTGATGAATATGGAGACATTTTGATGGATTTCGTGGAAAATTATCCAAACCCTCCTGTCAAGGAAAAGCCTGCAGTGGCAATCTCTATTCCTAGTTCATTGGTGAAATCGAAGAAGACCAAAGCCATGTCTCGAGTGAGTGAGATAGATCCAGCTGGCAAGCTTCGTCCTCATATTATCTATCTATTGGAGCTTGGCATGAATATTGAGCAAATTAAGAGTATTACTCGAAAATTTCCTTCCTTTGCCTATTATAGCTTAGAAGGAAAGATCAAACCAGTTGTTGAGTTTCTTTTAGAACTTGGAGTTCCAAAAGAAGATATCCCCATCATTCTCACTAAAAGGCCTCAATTATGTGGTATCAGTCTCTCTGAGAATCTTAAACCCACCATGAAGTTCTTGGAAGCCTTTGGTGTAGACAAGCAGCAATGGGCAAAGGTGATATACAGATTTCCAGCTCTTCTGACTTACAGCAAGCAGAAGGTGAAAACAAGTATAGATTTCCTCTATGAAATAGGTCTCTCAGAGGAGAACATAGGTAAGATCCTAACACGCTTCCCCAATATTATCAGTTACAATGTGGAAGACAAGCTAAGGCCAACGGCAAATTACTTCCGTTCCTTGGGAGTTGATGTTGCCATTCTTCTATTTCGATGTCCACAAAATTTTGGTCTTAGCATTGAGGCCAATCTAAAGCCTGTGACAGAATTTTTCTTAAAGAGAGGATACACAGTACAGGAAGTTGGGACCATGATTTCAAGATACGGATCATTGTACACATTTAGCTTGGCTGATAATTTGATTCCAAAATGGGAATTCTTTGTGACCATGGACTACCCCAAATCAGAGCTGGTTAAGTTCCCTCAGTTTTTCGGTTACAGTTTGCAAGATAGGATTAAACCAAGGTATGCTCGAATGAAAGAGTGCAGCGTGATGCTGCTGCTAAACCAGCTTCTGTCTCTGTCAAGTAGTGACTTTGAGGAGGCCTTGAAAAAGAAGATGAAGAAAATGCAGCTTGACCAGGATTCTAAACATGGTCAACCACACAAGGCAAAATGA 1431 0.4032 MEIPYLNRLAQHSSWTRMYTSTRTQPYHIAKVFFCQAKNDGSLKLVPPTLLVAEKEEAKAVLTLFLKKQGLSNAVAARTINKSDVFIDHLISKIHSKHKSRYLVGRELTTLEIRDALIPYLESLFDEYGDILMDFVENYPNPPVKEKPAVAISIPSSLVKSKKTKAMSRVSEIDPAGKLRPHIIYLLELGMNIEQIKSITRKFPSFAYYSLEGKIKPVVEFLLELGVPKEDIPIILTKRPQLCGISLSENLKPTMKFLEAFGVDKQQWAKVIYRFPALLTYSKQKVKTSIDFLYEIGLSEENIGKILTRFPNIISYNVEDKLRPTANYFRSLGVDVAILLFRCPQNFGLSIEANLKPVTEFFLKRGYTVQEVGTMISRYGSLYTFSLADNLIPKWEFFVTMDYPKSELVKFPQFFGYSLQDRIKPRYARMKECSVMLLLNQLLSLSSSDFEEALKKKMKKMQLDQDSKHGQPHKAK 476
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele42g1287 476 Pfam mTERF 185 364 IPR003690 GO:0003690|GO:0006355
Lele42g1287 476 Pfam mTERF 294 451 IPR003690 GO:0003690|GO:0006355
Lele42g1287 476 SMART mt_12 233 264 IPR003690 GO:0003690|GO:0006355
Lele42g1287 476 SMART mt_12 373 404 IPR003690 GO:0003690|GO:0006355
Lele42g1287 476 SMART mt_12 197 228 IPR003690 GO:0003690|GO:0006355
Lele42g1287 476 SMART mt_12 161 192 IPR003690 GO:0003690|GO:0006355
Lele42g1287 476 SMART mt_12 405 436 IPR003690 GO:0003690|GO:0006355
Lele42g1287 476 SMART mt_12 304 335 IPR003690 GO:0003690|GO:0006355
Lele42g1287 476 SMART mt_12 337 368 IPR003690 GO:0003690|GO:0006355
Lele42g1287 476 SMART mt_12 269 299 IPR003690 GO:0003690|GO:0006355
Lele42g1287 476 Gene3D Transcription termination factor 3, mitochondrial 239 461 IPR038538 -
Lele42g1287 476 PANTHER CGI-12 PROTEIN-RELATED 161 455 IPR003690 GO:0003690|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele42g1287 Lele-ChrLele42 24829457 24831729 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR mTERF Lele42g1287 mTERF 8e-21 No_clan