Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele42g1264 ATGGGCAGTGGCAGTGAGAAAACTTCGACTAAGCTAAGGACAAAGCTCGCTGTTGCAGTGAAGAGCATTCAATGGAGCTATGGCATTTTCTGGGCATCTTCAACTACCAAGCAAGGAACATTGGAATGGAATGAAGGTTACTACAACGGTGAAATCAAGACAAGGAAGACAGTGCAAGCCATGATGGAGCTAAAGGCTGACAAAATAAGGTTTCAGAGAAGTGAGCAACTAAGAGAACTCTATCAGTTTCTTCTCGTTGGCGGCGAAACCAATTCGCAGGCTAAAAGGCCTTCTGCTGCATTATCTCCAGAGGATCTCACAGACTTAGAGTGGTACTACTTGGTTTGCATGTCCTTCATGTTCAACCACAGCCAAAGTTTGCCGGGAAGAGCACTAGAAAAGGGCGAAACCATCTGGTTATGCAATGCTCAATATGCTGACAGCAAAGTTTTCTCTCGTTCTTTGCTAGCAAAGACTGTGGTGTGTTTTCCCTTCCTAGGAGGCGTTATCGAGATAGCCACAATCGAGCTAGTCCCAGAGGACCCTAATCTCATCCAACATGTCAAAACTTGTTTCTTAGAATTCTCAAAGCCTATCTGCACTGAAAAACCTTCCTCTGCACTTAACAAAGAAGATGAAGATAAAGATCCAACATGCACCAAGGTTGATGCTTGGACAACGAATGATCATGATATAATAATGACTTTGGAAAACCTATGTTCCCCTACGAAGGAACTACAAGAAGATAACAATGAAGAGCTTAACATGGATTCTTCTGATGAATGTTGTAATGGTTGTGACCATCACTATCAGGTTGAAGACTCCATGTTTGAAGATTCCTTGAGTTCTGGGGATTGTATATCAGAATTGCTTGAGAAGCAAGCCAAGGAAGTTACAAATGTAGATCAAGGTCAGTTAAGATTAACAGAACCTCTTCATGACTGCAACCACTCAAAACTTGGTTCCTTGGAGATTGGAACCAGCATTGAAGACTTGCACTACACAAGAACTCTCAGTGCTCTTTTGGGAAACTCTTTGACGATGTTTAAAGGACATTCACACGCTAGCAACTCGAATCAGAGGTCGAGTTTCGTACCATGGAAGACTGGAAGAGTTGTTGCTGAGAGGGCGAGGCGAAAGTTAGACCAGAGCATGTTGAAGAATATTCTGTTCACTGTCCCTGTTATGCATAACAGATGCTTCTCTCCCAAGCCACCAAAACAACATGATATAACAGAATTTCACAGAACATTGGACAGTGAGGAAAGAAGAGAAAGTGAAAACTATCAAGTTCTCAAGTCTATGGTCCCTTCTATAGACGAGGTGGACAAGGTTTCAATCCTCAATGACGCGTTCAAATACATGAAAGAGCTTGAGGCAAAAGCGGAAGAACTAGAATCTTGCATGGACATTGCAGATTCTGAAACCAGAATGAGAAGCTCATCAGAAGTCATGGAGCAGACGTCCGATAACTGCGACATCAGAGAAGTTTCCAACACCAAGAAACCGCAGATGAACAAGAGGAAAGCTTGTGACATTGATGGATGTGTCGCAGACTTAGACAGTGTAATTATTAAAGGTAAATCATGGGATGTAAAAGTGGAGATGAAGGAGCAGGAGGTTGAGATTGAGATCAAATATCCTTATAGGAAATTGATATTGCTCGAAATCATGGATGCTATAAGCAACCTGCATTTAGAAGCTCACACAGTTCAATCTTCAACAGTTGATGGATTTCTCATATTGACACTTAAATCTAAGGATGAAGGCCAAGATATTGCTTGA 1785 0.4196 MGSGSEKTSTKLRTKLAVAVKSIQWSYGIFWASSTTKQGTLEWNEGYYNGEIKTRKTVQAMMELKADKIRFQRSEQLRELYQFLLVGGETNSQAKRPSAALSPEDLTDLEWYYLVCMSFMFNHSQSLPGRALEKGETIWLCNAQYADSKVFSRSLLAKTVVCFPFLGGVIEIATIELVPEDPNLIQHVKTCFLEFSKPICTEKPSSALNKEDEDKDPTCTKVDAWTTNDHDIIMTLENLCSPTKELQEDNNEELNMDSSDECCNGCDHHYQVEDSMFEDSLSSGDCISELLEKQAKEVTNVDQGQLRLTEPLHDCNHSKLGSLEIGTSIEDLHYTRTLSALLGNSLTMFKGHSHASNSNQRSSFVPWKTGRVVAERARRKLDQSMLKNILFTVPVMHNRCFSPKPPKQHDITEFHRTLDSEERRESENYQVLKSMVPSIDEVDKVSILNDAFKYMKELEAKAEELESCMDIADSETRMRSSSEVMEQTSDNCDIREVSNTKKPQMNKRKACDIDGCVADLDSVIIKGKSWDVKVEMKEQEVEIEIKYPYRKLILLEIMDAISNLHLEAHTVQSSTVDGFLILTLKSKDEGQDIA 594
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele42g1264 594 SMART finulus 418 464 IPR011598 GO:0046983
Lele42g1264 594 Pfam bHLH-MYC and R2R3-MYB transcription factors N-terminal 12 192 IPR025610 -
Lele42g1264 594 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 425 472 IPR036638 GO:0046983
Lele42g1264 594 Gene3D - 422 498 IPR036638 GO:0046983
Lele42g1264 594 Coils Coil 448 475 - -
Lele42g1264 594 PANTHER TRANSCRIPTION FACTOR TT8 4 588 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele42g1264 Lele-ChrLele42 24701596 24708221 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele42g1264 1 594 Basic Helix-Loop-Helix Transcription Factor Gene Family AT5G41315 38.626 1.69e-121 371