Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele42g1244 ATGAAGAGTCCAACTTCCCATTCAAGTCGCCGGATCTCCAGCTCCGGCTACCGCACGCCAGACCACCGCTACGCCTACTCCTCCAGCTATGATTCGTCCGGGGTTAGCACCACCATCGTCAAGTCAAACTCCTCTAGGAACCCATTCGCGGCCGCCGCTAGATCAGTGGCTGCGGTTTTTGTTGCTTGCTTCACCCCACCGGATGAGAGTAACTCGAAGAGCTTCGTGGATTCTCAGGAGTTCAAAGCTTCATCTTCCTCCTCCGCTGTATCTGATTCTTTGGGAGCTGGTAGTCAGAGAAATAGACGAATCAGTTCAAGTTCATACAAGTCAACTCAGGGAAAAGAGCCTAGATCTCTGAATTTCACCATGGAGGATATCTTCCAAGCCACAAGAAACTTCTCCCCTGCTTACAAGGTCGGTCAAGGTGGTTTTGGTACCGTGTACAAGGCAAGTTTCCATGACGGAACTGTAGTTGCAGTAAAGCGTGCCAAGAAGAGTTTATATGAGAAACATTTGGGTTCTGAGTTCCAAAGTGAGATCCAAACGTTATCACGGGTTGAACATTTGAATTTGGTCAAGTTCTATGGATATTTGGAGCAAGGAGATGAAAGAATTCTTGTTGTGGAGTATGTCCCAAATGGAACCCTTAGAGAGCATTTAGATTGCATTCGTGGGAACATTTTAGACCTTGCTTCTCGTCTAGACATTGCGATTGATGTGGCTCATGCTATCACCTATCTTCATATGTATACAGATCATCCTATTATTCATAGAGACATTAAATCCTCCAACATTCTTCTTACTGAAAATTTGCGAGCTAAGGTAGCAGACTTTGGTTTTGCTAGACAGGCACCTGACAGTGATTCTGGTGTGACTCATGTATCCACCCAAGTTAGAGGAACCGCCGGCTACTTGGATCCTGAATATCTCAGAACCTATCAACTCACTGAGAAGAGTGACGTCTATTCATTTGGCGTTTTACTCGTTGAACTTGTCACTGGTAGACGTCCCATTGAACCAAAATTTGAACTCAAGGAGCGAATCACTGCAAAATGGGCTATGAAGAAATTCATTGAGGGCAATGCCATATCGGTGTTGGACCCGAAACTAGATCACAATGCTGCAAATAATCTGGCGCTAGAAAAGATATTTGAACTGGCCTTGCAGTGTTTGGCACCTCGTAGACAAAGCAGGCCTCGTATGAAGAAATGTGCTGAGATCCTTTGGACCATCCGCAAGGATTACAGAGAGCTATCAGCTTCAGATTTTCGTTCATTTTCCTCTTCTTCCCAGAGGAGTGCGTCAATAAAGGAGTGA 1320 0.4538 MKSPTSHSSRRISSSGYRTPDHRYAYSSSYDSSGVSTTIVKSNSSRNPFAAAARSVAAVFVACFTPPDESNSKSFVDSQEFKASSSSSAVSDSLGAGSQRNRRISSSSYKSTQGKEPRSLNFTMEDIFQATRNFSPAYKVGQGGFGTVYKASFHDGTVVAVKRAKKSLYEKHLGSEFQSEIQTLSRVEHLNLVKFYGYLEQGDERILVVEYVPNGTLREHLDCIRGNILDLASRLDIAIDVAHAITYLHMYTDHPIIHRDIKSSNILLTENLRAKVADFGFARQAPDSDSGVTHVSTQVRGTAGYLDPEYLRTYQLTEKSDVYSFGVLLVELVTGRRPIEPKFELKERITAKWAMKKFIEGNAISVLDPKLDHNAANNLALEKIFELALQCLAPRRQSRPRMKKCAEILWTIRKDYRELSASDFRSFSSSSQRSASIKE 439
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele42g1244 439 SMART serkin_6 134 411 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele42g1244 439 MobiDBLite consensus disorder prediction 88 117 - -
Lele42g1244 439 CDD STKc_IRAK 140 409 - -
Lele42g1244 439 FunFam Calmodulin-binding receptor-like cytoplasmic kinase 3 212 423 - -
Lele42g1244 439 Gene3D Transferase(Phosphotransferase) domain 1 212 433 - -
Lele42g1244 439 ProSitePatterns Serine/Threonine protein kinases active-site signature. 256 268 IPR008271 GO:0004672|GO:0006468
Lele42g1244 439 ProSitePatterns Protein kinases ATP-binding region signature. 140 166 IPR017441 GO:0005524
Lele42g1244 439 MobiDBLite consensus disorder prediction 1 41 - -
Lele42g1244 439 Pfam Protein kinase domain 138 407 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele42g1244 439 FunFam Calmodulin-binding receptor-like cytoplasmic kinase 2 97 211 - -
Lele42g1244 439 SUPERFAMILY Protein kinase-like (PK-like) 114 412 IPR011009 -
Lele42g1244 439 ProSiteProfiles Protein kinase domain profile. 134 411 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele42g1244 439 PANTHER OS01G0750732 PROTEIN 20 433 - -
Lele42g1244 439 Gene3D Phosphorylase Kinase; domain 1 94 211 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele42g1244 Lele-ChrLele42 24520186 24522495 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele42g1244 111 412 Receptor kinase-like Gene Family AT1G30570 43.377 2.78e-70 236
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-IV Lele42g1244 Pkinase 1.2e-50 CL0016