Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele42g1243 ATGGAGAGGAAGTCACTCGTTGCTGTGTTTTCCATTCTCATCATTCTCCTGGCTGCTGAAGAAATGGTGGTGAAGACGGAGGCAAACACGTGTGAGAAGCCAAGCAAGTACTTCTTAGGAGCATGCATTGGGACAAGCGGCAATCAACAGTGCGGCTATCTCTGTGTTAGAGGAGAAGGATTACTCGGTGGCTCTTGCAAAGGCCTCAAGTGCGTCTGCACCAAAGCTTGCTGA 234 0.5 MERKSLVAVFSILIILLAAEEMVVKTEANTCEKPSKYFLGACIGTSGNQQCGYLCVRGEGLLGGSCKGLKCVCTKAC 77
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele42g1243 77 Pfam Gamma-thionin family 30 77 - -
Lele42g1243 77 SUPERFAMILY Scorpion toxin-like 30 77 IPR036574 -
Lele42g1243 77 SMART gth_4 30 77 IPR003614 GO:0006952
Lele42g1243 77 Gene3D - 24 77 IPR036574 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele42g1243 Lele-ChrLele42 24516786 24517132 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele42g1243 1 77 Plant Defensins Gene Families AT5G63660 35.443 1.99e-09 47.4