Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele42g1242 ATGACAGCAGGGTTAGGGGGATCCAAAGTCGACTTTTGCTGCTGCCTTACCTATGAAACTGTTCAAAACCCTACTATCACAGAAGCCCTAATCATCATCATGGAGAGGAAGTATCTTGTTGCTGTCTTTTCCATTCTCGTCCTTCTCTTCGTTGCTCAAGAAATGGCGGTGAAGACGGAGGCGAAAACATGCGAGAAGCCTAGCAAGTTCTTCTCGGGAGGATGCGTTGGGACGACCGGCAACAAACAGTGCGACTATCTCTGTAGGAGAGGCGAAGGATTGCTCAGTGGAGCTTGCAAAGGCCTCAAGTGCGTCTGCACTAAATCTTGCTGA 333 0.4925 MTAGLGGSKVDFCCCLTYETVQNPTITEALIIIMERKYLVAVFSILVLLFVAQEMAVKTEAKTCEKPSKFFSGGCVGTTGNKQCDYLCRRGEGLLSGACKGLKCVCTKSC 110
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele42g1242 110 SUPERFAMILY Scorpion toxin-like 61 110 IPR036574 -
Lele42g1242 110 SMART gth_4 63 110 IPR003614 GO:0006952
Lele42g1242 110 Pfam Gamma-thionin family 62 110 - -
Lele42g1242 110 Gene3D - 56 110 IPR036574 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele42g1242 Lele-ChrLele42 24513271 24515855 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele42g1242 39 110 Plant Defensins Gene Families AT2G02120 38.667 1.47e-08 46.2