Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Lele42g1239 | ATGGGCTTTCCGGTGGGATACACCGACGTCGTTTTACCAAATCTCTTCCTCCACACACTCTCGCTCCTCGGATTCATCCGCAACCTCATCTTCCTCCTCTTCCACTTTCTCGGCCTCTCCGATTTCCTCGAAACGGAGGTCGTCTGGTCCGAATCTCACGCTCGATTGCCCGACAGCCCCCCGGTGTCCGCGCTCCTGATCCGAGAATTCCTCCCTGTCGTCAAGTTTGGCGAGCTCCTCGCCGCTGCCGCCGCCAGCGACACGCCGGAGAGTTGTGCCGTCTGCCTGTACGAGTTCGAGACGGAGGAGGAAATCCGGTGCTTGACCAATTGCAAGCACATTTTTCACCGGGCTTGTCTGGACCGTTGGATGGATCACGATCAGAAGACTTGTCCCTTGTGTAGGACCCCCTTTGTGCCTGATGATATGCAGGATGATTTCAATGAACGGCTCTGGGCCGCTTCTGGAGTCTCTGATGTTTATGGAGACTACACTTCCCTGTGA | 504 | 0.5615 | MGFPVGYTDVVLPNLFLHTLSLLGFIRNLIFLLFHFLGLSDFLETEVVWSESHARLPDSPPVSALLIREFLPVVKFGELLAAAAASDTPESCAVCLYEFETEEEIRCLTNCKHIFHRACLDRWMDHDQKTCPLCRTPFVPDDMQDDFNERLWAASGVSDVYGDYTSL | 167 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Lele42g1239 | 167 | CDD | RING-H2 | 92 | 135 | - | - | |
Lele42g1239 | 167 | FunFam | RING-H2 finger protein ATL73 | 67 | 142 | - | - | |
Lele42g1239 | 167 | SUPERFAMILY | RING/U-box | 91 | 141 | - | - | |
Lele42g1239 | 167 | SMART | ring_2 | 92 | 134 | IPR001841 | - | |
Lele42g1239 | 167 | Gene3D | Zinc/RING finger domain, C3HC4 (zinc finger) | 70 | 143 | IPR013083 | - | |
Lele42g1239 | 167 | ProSiteProfiles | Zinc finger RING-type profile. | 92 | 135 | IPR001841 | - | |
Lele42g1239 | 167 | PANTHER | RING ZINC FINGER PROTEIN-RELATED | 20 | 154 | - | - | |
Lele42g1239 | 167 | Pfam | Ring finger domain | 91 | 135 | IPR001841 | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Lele42g1239 | Lele-ChrLele42 | 24480858 | 24481361 | Dispersed/Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Lele42g1239 | 1 | 166 | C3H Transcription Factor Family | AT1G63840 | 51.136 | 5.65e-54 | 167 |
Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
---|---|---|---|---|---|---|---|---|---|
Lele42g1239 | 42 | 24480858 | 24481361 | Lele43g0112 | 43 | 1209038 | 1209541 | hybridization | |
Lele42g1239 | 42 | 24480858 | 24481361 | Lele44g0117 | 44 | 714296 | 714799 | hybridization |