Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele42g1226 ATGAGCCGAGCACGGGATCCACACAGATCTTTCTTCCCTTTTGGAAACCCTTTCCGAATGATATCACCTAAAGCCTCGCAAATGTCCCCCAGACTTCATGAAATATTAAATTCTTTTGAGGCAACACTAGCAGAGAGGCTGAAGAAGCTTATGCCGAAAAGCAAGGATGAAATTCTTAGTATATCTTGGATGACTCTAGCAATGCAATCACTTTGTGAAACTCATAATGATATTAAAACCCTTGCCCTAGATATTGATCTCCCTGTGAGTGAATGGGATGAAAAATGGATTGATGTGTACTTAGACATAAGTGTGAAGTTGCTAGATATATGCATTGCATTTAGTTCTGAGCTCTCACGCCTGAACCAGGGGCATCTTTTGCTTCAGTGCGCGTTACACAATTTAAACACTCCCTCCCCACAGCAATTTGTTCGAGCATGTTCTTCAATTGATGGATGGAGGCATCATATTAGTTCTAGGAATCCTAGGATTGAGAAATGCGGCACCATTTTAGATAATCTTTTGGGATCACTTGATTTGCCAAAGGTTAAGAATTCAGCTAAAGGGAAGGTTTTGATGCAAGCTATGTATGGAGTGAAGGTGCAGACAGCATTTTTATGCAGTGTGTTTGCCGCGGTTTTCTCAGGCTCTGCAGAGAAGTTGTTTGATCGGAATGTAGCTGACACATATTTGTGGGCTCAAGCTTTTACAAGTTTGCGGCATGTTGTAAATGAGGAAATTGAAGTTAGATTTTCCAATGGAAGATTTGCTGTATTGAAGGAGTTGGAAGCAGTCGACACCTTTGTGAAGAAATTATACCCTATAATCCAGGGTGAACAAGATACTGTTGAGACAGAAGTGCTTCTGAAGACTGTTGAGGAAACAAGCAAGGCGGCAGAGAAGCTTTCACAAGGACTAGATCATCTTGCAAATGAAGTGGATGGTTTTTTCCGAGTAGTCTTATCTGGCCGTGACAATTTGCTATCTTCTCTGAGGTCAGGTGCAACTTTCTGCGACAGTACCCCTGGGGGTAATATGGATGAGCAGAGAGTCAATTGA 1059 0.4193 MSRARDPHRSFFPFGNPFRMISPKASQMSPRLHEILNSFEATLAERLKKLMPKSKDEILSISWMTLAMQSLCETHNDIKTLALDIDLPVSEWDEKWIDVYLDISVKLLDICIAFSSELSRLNQGHLLLQCALHNLNTPSPQQFVRACSSIDGWRHHISSRNPRIEKCGTILDNLLGSLDLPKVKNSAKGKVLMQAMYGVKVQTAFLCSVFAAVFSGSAEKLFDRNVADTYLWAQAFTSLRHVVNEEIEVRFSNGRFAVLKELEAVDTFVKKLYPIIQGEQDTVETEVLLKTVEETSKAAEKLSQGLDHLANEVDGFFRVVLSGRDNLLSSLRSGATFCDSTPGGNMDEQRVN 352
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele42g1226 352 Coils Coil 292 312 - -
Lele42g1226 352 Pfam Protein ROH1-like 211 330 IPR008511 -
Lele42g1226 352 Pfam Protein ROH1-like 34 136 IPR008511 -
Lele42g1226 352 PANTHER BPS1-LIKE PROTEIN 16 331 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele42g1226 Lele-ChrLele42 24395918 24396976 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele42g1226 42 24395918 24396976 Lele43g0123 43 1292446 1293447 hybridization
Lele42g1226 42 24395918 24396976 Lele44g0129 44 799424 800425 hybridization