Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele42g1210 ATGGAGGACGATTGGGATCTGCACGCCGTCGTCAGAGGCTGCGCCACCGTCTCCTCCTCCTCCTCTTCCCCTTCCTCCGCCGTCACCGCCACCTCCTCAGCATCTTCCTATGTTTTTGGGCTTCCTCCGTTTGTTGGGACTGAAAAAGTTAGCCAAGTTTTGCCCCTCTCAGATTTAGACCCTCTTGAAGCCAGACCTTCTTCTTCCTCCATTGAAGAATTACACGAGCTCTGGAAACCTTTCTTCCCCAAATCATCCAAGCCTCCTTCTTCATCGTCTTCACTGGTTTCTCCTCTGTCTCCTTCTTCTTCCTTCTCCTACAATTCTCCCTCTGCCCCCACCAAACCTGTCCAGACGACACAGCACAAACAACAGAATCTGCAGCCTAAGAACAAGTTATCTCATACTGGTCCTGTCTCCACCACTCCAAGATCTAAAAGAAGGAAGAATCAGCTTAAGAAAGTTTGTCAGGTTCCAGCCGAGTCTCTCTCCTCTGATATCTGGGCATGGAGGAAATATGGCCAGAAACCCATCAAAGGCTCTCCGTATCCAAGGGGATATTACAGATGTAGCAGCTCGAAAGGATGCTTAGCTCGGAAACAAGTGGAGAGGAACAGATCAGACCCGTTGATGTTCATAGTCACCTACACGGCGGAGCACAACCACCCTGCTCCTACTCATCGGAACTCTCTCGCCGGCTCCACCCGTCAGAAGCCCTCGACCACCTCTGCCGCCGCCAGCGGCGGCGGTGAAACAGACAAATCCCCGATTAAAGCCAGTTCTCCGGCGACCTCTGGTGTGGAAGAACAAGATACTGTACCTCAAAGCACGGACTTCGAAAGCAAGGTGGAAATGGAAGATTTGATGGAGGAAGAGGAAGACGATGAACTCAGGTTATCAGATTCGGTGTTAACAGATGATTTCTTTGAAGGGTTAGATGAACTTACAGGGCCGTCGCCTCCGCCTGCAGCGGCGGCGCCCGTTACCGGAGACTGCTTTGCTGAACCCTTCTCGACTGGTTTCGCTCTACCGGCATGGCCGACCACAAATGCCGCCGCGACCATCGCCGGTGGCAATTGTTGA 1083 0.5254 MEDDWDLHAVVRGCATVSSSSSSPSSAVTATSSASSYVFGLPPFVGTEKVSQVLPLSDLDPLEARPSSSSIEELHELWKPFFPKSSKPPSSSSSLVSPLSPSSSFSYNSPSAPTKPVQTTQHKQQNLQPKNKLSHTGPVSTTPRSKRRKNQLKKVCQVPAESLSSDIWAWRKYGQKPIKGSPYPRGYYRCSSSKGCLARKQVERNRSDPLMFIVTYTAEHNHPAPTHRNSLAGSTRQKPSTTSAAASGGGETDKSPIKASSPATSGVEEQDTVPQSTDFESKVEMEDLMEEEEDDELRLSDSVLTDDFFEGLDELTGPSPPPAAAAPVTGDCFAEPFSTGFALPAWPTTNAAATIAGGNC 360
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele42g1210 360 MobiDBLite consensus disorder prediction 85 145 - -
Lele42g1210 360 MobiDBLite consensus disorder prediction 222 249 - -
Lele42g1210 360 Gene3D WRKY domain 148 218 IPR036576 GO:0003700|GO:0006355|GO:0043565
Lele42g1210 360 Pfam WRKY DNA -binding domain 166 223 IPR003657 GO:0003700|GO:0006355|GO:0043565
Lele42g1210 360 MobiDBLite consensus disorder prediction 219 297 - -
Lele42g1210 360 FunFam WRKY transcription factor 22 148 218 - -
Lele42g1210 360 ProSiteProfiles WRKY domain profile. 159 225 IPR003657 GO:0003700|GO:0006355|GO:0043565
Lele42g1210 360 SMART WRKY_cls 164 224 IPR003657 GO:0003700|GO:0006355|GO:0043565
Lele42g1210 360 PANTHER WRKY TRANSCRIPTION FACTOR 30-RELATED-RELATED 3 316 IPR044810 GO:0003700
Lele42g1210 360 SUPERFAMILY WRKY DNA-binding domain 162 225 IPR036576 GO:0003700|GO:0006355|GO:0043565
Lele42g1210 360 MobiDBLite consensus disorder prediction 257 279 - -
Lele42g1210 360 MobiDBLite consensus disorder prediction 82 157 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele42g1210 Lele-ChrLele42 24271973 24273317 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele42g1210 1 358 WRKY Transcription Factor Family AT4G01250 44.715 4.66e-84 255
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Lele42g1210 WRKY 6.7e-25 CL0274