Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele42g1204 ATGGAAAACCACCTCCTGGAGGTGGACCCACCAAACCCTCCACCTCCGCCGCCACCTCAAAACCCTACCTCCTTCATCTTCCCGACGGTGGCATCTTCGTCGGCGGTGCTGGAAAAGCCGATGGACCCTCAAGGGCTTCTTGACATTGACTGGGCTAACATTTTCTCATCATCAGGGCAAAGCAATAACTTGCAGGTTGGGGCTGAGGGCAGTTACAAACCAATGGTGGAAGGTGGTGGTGGTGTTGCTTTGATGGGTGAAATGAATGGAGGTCGTGAGGATATGGAAAAGGAGAATCATAATAATAAAGATAAGAGAAAAGGAGGAGGAGGAGGAGGTGGGAGGGTGAAGAAGACGACGAGGCCGAGGTTCGCTTTTCAGACGAGAAGTGCTGATGATATTCTCGACGACGGTTACCGTTGGAGGAAGTATGGCCAGAAAGCAGTCAAGAATAGCGTTTATCCCAGGAGCTACTACAGATGCACGCATCACACATGCAATGTGAAGAAACAAGTGCAGAGGTTGTCGAAAGACACAAGCATAGTGGTGACAACGTACGAGGGAATTCACAACCACCCTTGTGAGAAGCTCATGGAAACTCTCACTCCTCTTCTCAAGCAAATCCAATTCCTCACCAGCTTCTAG 645 0.4992 MENHLLEVDPPNPPPPPPPQNPTSFIFPTVASSSAVLEKPMDPQGLLDIDWANIFSSSGQSNNLQVGAEGSYKPMVEGGGGVALMGEMNGGREDMEKENHNNKDKRKGGGGGGGRVKKTTRPRFAFQTRSADDILDDGYRWRKYGQKAVKNSVYPRSYYRCTHHTCNVKKQVQRLSKDTSIVVTTYEGIHNHPCEKLMETLTPLLKQIQFLTSF 214
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele42g1204 214 SUPERFAMILY WRKY DNA-binding domain 128 194 IPR036576 GO:0003700|GO:0006355|GO:0043565
Lele42g1204 214 MobiDBLite consensus disorder prediction 1 24 - -
Lele42g1204 214 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 21 196 IPR044810 GO:0003700
Lele42g1204 214 ProSiteProfiles WRKY domain profile. 130 195 IPR003657 GO:0003700|GO:0006355|GO:0043565
Lele42g1204 214 SMART WRKY_cls 135 194 IPR003657 GO:0003700|GO:0006355|GO:0043565
Lele42g1204 214 MobiDBLite consensus disorder prediction 92 121 - -
Lele42g1204 214 MobiDBLite consensus disorder prediction 92 111 - -
Lele42g1204 214 Gene3D WRKY domain 120 194 IPR036576 GO:0003700|GO:0006355|GO:0043565
Lele42g1204 214 MobiDBLite consensus disorder prediction 8 24 - -
Lele42g1204 214 FunFam WRKY transcription factor 57 121 195 - -
Lele42g1204 214 Pfam WRKY DNA -binding domain 136 193 IPR003657 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele42g1204 Lele-ChrLele42 24236697 24238838 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele42g1204 101 214 WRKY Transcription Factor Family AT5G41570 69.298 9.64e-56 173
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Lele42g1204 WRKY 5.6e-25 CL0274