Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele42g1180 ATGGGAACCAGTGAGGAAGGGAAGTCTACCAAAGTGGACAAACCCTCTTCACCAGTGACACCGGATCAGGCAAACCAGATCAACCCGACCAATTTTCATCTGTATCCTGATTGGGCTGCCATGCAGGCATATTATGGGCCAAGGGTCAGCATGCCCCCATACTATAACTCAGCCATGGCTCCTGCTCATGCTCCTCACCATTACATGTGGCCACCACAGCCTATGATGCCACCTTATGGGGCACCTTATGCAGCAATATACTCTCATGGAGGTGTTTATCCTCATCCTGCAGTTCCAATTGGGCCACAGTCACATGGTCAAGGAATTCCATCTCCCCCTGCTGCTGGAACTCCTTTAAGCATAGAGACACCAACCAAATCGACAGGAAATAATGATCAGGGCTTAATGAAGAAATTGAAGGAGTTTGAAGGACTTGCAATGTCTATTGGCAATGGCAATGCTGAGAGTGCTGAGCAAAGAGTTGAAAATAGGCTATCGCAGAGTGAATACTTTTGTGATGATTTGACCAGTGAGGATACTGAAGGTTCAAGTGATGGAAGTGACAGCAACTCTTCTGGGGCTAATCAAACAAGAAGGAAAAGAAGCCGAGAGGGAACACCAACCACTGCTGGTGGGGATGGGAAAGCTGAGATACAGGGCACTCTACTTCCCAAAGAGACTGCAGCTTCCAATAAGTCGTTGGCAGTTGTCCCTGCTAGTGTTGCTGGAAAAATAGCCGGACCTGTAGTTTCTTCAGGTATGATCACTGCTCTGGAGTTAAGGGACCCTCATTCTAAACCTAATCTCACAAATGTTGCCCCACCTGGTGCAGTGATTCCACCTGAAGCTTGGTTACAGAATGAACGTGAGCTGAAGCGAGAGAGGAGGAAACAGTCAAATCGAGAATCTGCTAGAAGGTCCAGGTTAAGAAAACAGGCTGAGACTGAAGAGCTTGCACGAAAAGTTGAATCCTTGAATGCTGAGAATATGACTCTGAAATCAGAAATTAACCGTTTGACTGAAAATTCTGAGAAATTGAGAGCTGAAAATGCTGCATTGATGGAAAAACTGAAAAATGTGCAACAAGGAAAGACGGAAGAAATAGTTTTGAACAGCATTGAGGGCAAGAGGGCTACACCGATAAGCACAGAAAACTTGTTATCTAGAGTTAATAATTCCAGTTCTAACGATAAAACTACAGAGGAAGACAATGATTTTTGTGATGAGAAACAGAAATCCAGTGCGAAGCTGCATCAACTACTTGATACGAGTCCTAGAGCTGATGCCGTGGCAGCTGGCTGA 1302 0.4547 MGTSEEGKSTKVDKPSSPVTPDQANQINPTNFHLYPDWAAMQAYYGPRVSMPPYYNSAMAPAHAPHHYMWPPQPMMPPYGAPYAAIYSHGGVYPHPAVPIGPQSHGQGIPSPPAAGTPLSIETPTKSTGNNDQGLMKKLKEFEGLAMSIGNGNAESAEQRVENRLSQSEYFCDDLTSEDTEGSSDGSDSNSSGANQTRRKRSREGTPTTAGGDGKAEIQGTLLPKETAASNKSLAVVPASVAGKIAGPVVSSGMITALELRDPHSKPNLTNVAPPGAVIPPEAWLQNERELKRERRKQSNRESARRSRLRKQAETEELARKVESLNAENMTLKSEINRLTENSEKLRAENAALMEKLKNVQQGKTEEIVLNSIEGKRATPISTENLLSRVNNSSSNDKTTEEDNDFCDEKQKSSAKLHQLLDTSPRADAVAAG 433
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele42g1180 433 MobiDBLite consensus disorder prediction 396 416 - -
Lele42g1180 433 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 295 310 IPR004827 GO:0003700|GO:0006355
Lele42g1180 433 MobiDBLite consensus disorder prediction 103 133 - -
Lele42g1180 433 FunFam G-box binding factor 3 291 346 - -
Lele42g1180 433 MobiDBLite consensus disorder prediction 1 28 - -
Lele42g1180 433 CDD bZIP_plant_GBF1 293 341 IPR045314 GO:0003700|GO:0006355
Lele42g1180 433 Gene3D - 291 345 - -
Lele42g1180 433 Pfam G-box binding protein MFMR 1 99 IPR012900 -
Lele42g1180 433 MobiDBLite consensus disorder prediction 372 433 - -
Lele42g1180 433 MobiDBLite consensus disorder prediction 118 133 - -
Lele42g1180 433 SUPERFAMILY Leucine zipper domain 291 347 IPR046347 GO:0003700|GO:0006355
Lele42g1180 433 SMART brlzneu 288 352 IPR004827 GO:0003700|GO:0006355
Lele42g1180 433 PANTHER G-BOX-BINDING FACTOR 3-RELATED 1 407 IPR044827 GO:0003700|GO:0006355|GO:0043565
Lele42g1180 433 MobiDBLite consensus disorder prediction 376 395 - -
Lele42g1180 433 MobiDBLite consensus disorder prediction 286 323 - -
Lele42g1180 433 MobiDBLite consensus disorder prediction 175 224 - -
Lele42g1180 433 MobiDBLite consensus disorder prediction 13 28 - -
Lele42g1180 433 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 290 353 IPR004827 GO:0003700|GO:0006355
Lele42g1180 433 Pfam Disordered region downstream of MFMR 132 265 - -
Lele42g1180 433 Coils Coil 308 363 - -
Lele42g1180 433 MobiDBLite consensus disorder prediction 182 196 - -
Lele42g1180 433 MobiDBLite consensus disorder prediction 264 336 - -
Lele42g1180 433 Pfam bZIP transcription factor 288 350 IPR004827 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele42g1180 Lele-ChrLele42 24099365 24102610 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele42g1180 3 433 bZIP Transcription Factor Family AT2G46270 51.494 1.57e-122 358
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Lele42g1180 MFMR_assoc 2.5e-19 No_clan