Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Lele42g1163 ATGGAGGAAGGGCAATTTAGTCTGATTAATGAGCTAAACCAAGGGAAGGAGCTAGCAAGGTTGCTCTGTAACCATATAGCATCTTCTTCTTCTTCATCTTCTTCAGCTTCTCATGAGACGAATGAGCTCTTGATTGAGAAAATACTCTTTTCATATGAGAAAGCTCTGAAGATGCTTACAAGTGAAGAAAATGTGAGTGAGGCTAATCCCACCATTAATGCTGATGGGAGCGCCAGATGTGAGGTATTGGACCAAGAAGACAATCACAGAGATGTCTGCAAGAAAAGGAAGATCATGCCTAAATGGTCAGAACAAGTGAAGGTTTGCTCAAGAACCGGGATTGAGGGTTCCTTAGATGATGGATATAGTTGGAGAAAATATGGCCAGAAGGACATCCTCGGAGCTAAATTTCCTAGAGGATACTACAGATGCACTCATAGATTCTTACAAGGTTGTGAAGCAACAAAACAAGTTCAAAGGTCTGATAAAGATCCAACAATATTCGAGGTGACCTACAGAGGAAGACATACCTGCAACAACCAGGCATATTTTAACAAAGCAGCATCATCATCGTCAAAGAAAAATAAGATGGGTTTTAGAGAGAACAACCATCATAATCATCAACAATACCATAAAAGAGAGGAGGAGAAGAAGGAGGAAGGAGAAGAGAAGATGGAACAATCCCTAGTGACATTCTTCAATTTTGAACCAGAACTTGAAGTCAAAATGGACGACATTTTCCCGACATCGAGTGGATTTCCTTGGTCATCAGATAATTACCAGTTCGTGGAAAACTTCATTTCCCCATCAACCTCGGAATCGAACCTTTTTTGTCTGTCACCGTGTCACATGGGAAGTGCAGGCATGGGCCAAAACGTGCAAAGTTCAGAATCTGAAGTGACAGACATAGTTTCAGCCCCAACCTCAGTCACCAATTCGCCTTTGGTGGATTTGGATGTCTTGTTTGAGAAGGAAGATTTTCAATCCACTTTCCCTTTCAACACTTCTGAATTTTTCTCTTCTTAG 1026 0.4123 MEEGQFSLINELNQGKELARLLCNHIASSSSSSSSASHETNELLIEKILFSYEKALKMLTSEENVSEANPTINADGSARCEVLDQEDNHRDVCKKRKIMPKWSEQVKVCSRTGIEGSLDDGYSWRKYGQKDILGAKFPRGYYRCTHRFLQGCEATKQVQRSDKDPTIFEVTYRGRHTCNNQAYFNKAASSSSKKNKMGFRENNHHNHQQYHKREEEKKEEGEEKMEQSLVTFFNFEPELEVKMDDIFPTSSGFPWSSDNYQFVENFISPSTSESNLFCLSPCHMGSAGMGQNVQSSESEVTDIVSAPTSVTNSPLVDLDVLFEKEDFQSTFPFNTSEFFSS 341
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Lele42g1163 341 Pfam WRKY DNA -binding domain 119 179 IPR003657 GO:0003700|GO:0006355|GO:0043565
Lele42g1163 341 MobiDBLite consensus disorder prediction 197 223 - -
Lele42g1163 341 ProSiteProfiles WRKY domain profile. 113 181 IPR003657 GO:0003700|GO:0006355|GO:0043565
Lele42g1163 341 MobiDBLite consensus disorder prediction 194 223 - -
Lele42g1163 341 FunFam WRKY transcription factor 53 104 181 - -
Lele42g1163 341 SMART WRKY_cls 118 180 IPR003657 GO:0003700|GO:0006355|GO:0043565
Lele42g1163 341 PANTHER WRKY TRANSCRIPTION FACTOR 30-RELATED-RELATED 7 292 IPR044810 GO:0003700
Lele42g1163 341 Gene3D WRKY domain 102 180 IPR036576 GO:0003700|GO:0006355|GO:0043565
Lele42g1163 341 SUPERFAMILY WRKY DNA-binding domain 117 180 IPR036576 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Lele42g1163 Lele-ChrLele42 23971852 23973676 Dispersed/Wgd
       

Functional genes information


Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele42g1163 8 194 WRKY Transcription Factor Family AT4G23810 45.833 6.64e-47 160
       

Transcription factors information


Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Lele42g1163 WRKY 2e-27 CL0274