Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele42g1150 ATGAATTCAAAGGGACCTAAATTTGTGAGGTTTGATTATTGGAGTCCACAGTCATCACCAGCAACTGAGCAGAAAAGTTCAAACGATAATGGATATGGAAGAAAATTGGGACCAAGCTTAAGCTCTGTTTTGGATAGTATCAAAAGAAGACTTGAGGATGGGTCTGATAAGATAAAAAACACGAAAAAATCCTCAGCTGCTCATCCTAAAAGTTATAGATCGCCCAAGACATTGGCTCCTAGAAGAAAACCAAAATTCTTGATCCACAGGGGTCGTTTCTTCAGAAATGGAACCAAAATATTTGAAATCACGTCTGTGATGGCTGTCTCTATTAATTCTTCTGTTCTTCGTACATTCTTTGATCTTTTCGACATTCTTCACATAATATTTCAGTTTCGAACCGGGTTTATTGATCCTTCTACTCGGGTGGTTGTTTTATTTATCATTCCAAAACTGAAGGCCTCAGTTCCATTTTTGGAAAAGGACTTGTTGACATATATGATCGCGATCCAGTTTGTGAATGATCACCTTCATTTCATATGCAAGTTCTCTTGGACAGAACCTTGTGACGGTACTTATGTTGGGGAGATAATCTTTGCTCTCTGCATTGCCATCTTTGGATTAGTTCTGTTCTCTTTGCTTATTGGAAACCTGCAGAAATATTTGCAATTTGTAAACATTGGACTTGAGGAGATGAGAATCAAAAGGAGAGATGTAGAGCGATGGATGTCCCCCCGTATGCTTCCTGAGAAGATAAGGGAAAGAATTAGACGGTATGAACATTACAAATGGCAAGAAAATCGAGGTGTTGAAGAAGAAGCATTAATTGGTAACCTTCCTAAAGATCTCATTAGGGACATAAAGGGCCATCTTTGCTTGGATTACCTAAAAAAGTGGGTTCCACTGTTTGGGAAAATGGATGAACAATTGTTGGATGCAATGAGTGATAGATTGAAGCCAGTTCTTTATACAGAGAAGAGTCACGTTGTTCGTGAAGGAGATCCGGTCAATGGAACGCTCTTCAGTATGCGAGGAAAGCTCACTACTATGACGACAAATGGAGGAAGAACAGGTTCTAACTCCTCAGTTCTCCAAGCTGGTGACTTCTGTGGAGAAGAGCTTCTAACGTGGGCTTTGGACCCACATTCCTCTTCAATTCTTCCCATTTCAACAAGAACAGTGGAATCTATATCAGAAGTTGAAGCTTTAGCTCATGCCTGA 1221 0.3989 MNSKGPKFVRFDYWSPQSSPATEQKSSNDNGYGRKLGPSLSSVLDSIKRRLEDGSDKIKNTKKSSAAHPKSYRSPKTLAPRRKPKFLIHRGRFFRNGTKIFEITSVMAVSINSSVLRTFFDLFDILHIIFQFRTGFIDPSTRVVVLFIIPKLKASVPFLEKDLLTYMIAIQFVNDHLHFICKFSWTEPCDGTYVGEIIFALCIAIFGLVLFSLLIGNLQKYLQFVNIGLEEMRIKRRDVERWMSPRMLPEKIRERIRRYEHYKWQENRGVEEEALIGNLPKDLIRDIKGHLCLDYLKKWVPLFGKMDEQLLDAMSDRLKPVLYTEKSHVVREGDPVNGTLFSMRGKLTTMTTNGGRTGSNSSVLQAGDFCGEELLTWALDPHSSSILPISTRTVESISEVEALAHA 406
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele42g1150 406 Gene3D Helix hairpin bin 229 292 - -
Lele42g1150 406 SUPERFAMILY cAMP-binding domain-like 231 375 IPR018490 -
Lele42g1150 406 MobiDBLite consensus disorder prediction 1 39 - -
Lele42g1150 406 ProSiteProfiles cAMP/cGMP binding motif profile. 302 386 IPR000595 -
Lele42g1150 406 FunFam Cyclic nucleotide-gated ion channel 1 228 292 - -
Lele42g1150 406 MobiDBLite consensus disorder prediction 15 35 - -
Lele42g1150 406 MobiDBLite consensus disorder prediction 51 77 - -
Lele42g1150 406 Gene3D Jelly Rolls 300 406 IPR014710 -
Lele42g1150 406 CDD CAP_ED 302 404 IPR000595 -
Lele42g1150 406 PANTHER CYCLIC NUCLEOTIDE-GATED ION CHANNEL 15-RELATED-RELATED 192 404 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele42g1150 Lele-ChrLele42 23855151 23858103 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele42g1150 191 404 Ion Channels AT5G53130 71.163 7.63e-100 310