Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Lele42g1137 | ATGTTTTTAGGTGATAGAATGGAATCGAGTAGTCTTGATAGTACTGTATCATCCTTGACTATGGATGATGATGAGCATATTCCCCATCAGTTTTCTTCGATCACGACGAAGCTGCATAACAATGGCCCTGGTACTACCAGCGTCCACGAGCTGCTTGAATGCCCCGTTTGCACCAGCTCAATGTATCCTCCAATCCATCAGTGTCACAATGGGCATACACTTTGTTCAACTTGTAAGACAAGGGTACACAATCGATGTCCGACCTGTAGACAGGAACTTGGGGATATAAGGTGTCTGGCACTGGAGAAAATAGCAGAATCACTTGAACTGCCTTGCAGATACGGCTCGCTTGGTTGTCCAGAGATATTTCCCTATTATAGCAAACTCAAACATGAGTCTATTTGTAACTTCAGACCATACAACTGCCCGTATGCTGGGTCAGACTGTTCTGTTGTCGGGGATATTCCATACCTCGTTGCTCATTTACGGGATGACCACAGGGTCGATATGCATTCGGGATGCACATTTAACCATCGCTATGTCAAGTCTAATCCTGTGGAAGTAGAAAATGCAACATGGATGTTAACCGTCTTCCACTGTTTTGGTCAGTACTTCTGTCTCCATTTTGAAGCCTTCCAGCTTGGTATGGCTCCTGTTTACATGGCATTCCTTCGGTTCATGGGCGATGAAAGAGAAGCTCGGAGCTACTGCTACAGTCTGGAGATAGGAGGGAATGGTCGAAAACAAATATGGGAGGGCAGCCCAAGAAGCATAAGAGACAGCCATAAGAAAGTTAGGGACAGCCATGATGGCCTCATTGTATACAGAAACATGGCGCTTTTCTTCTCAGGTGGGGACAGGAAAGAGTTGAAGCTACGAGTCACAGGAAGGATCTGGAAAGAACAGCAAAATCCTGAAGGTGGAGTTTGCATACCCACTCTCTGTAGTTAA | 951 | 0.4564 | MFLGDRMESSSLDSTVSSLTMDDDEHIPHQFSSITTKLHNNGPGTTSVHELLECPVCTSSMYPPIHQCHNGHTLCSTCKTRVHNRCPTCRQELGDIRCLALEKIAESLELPCRYGSLGCPEIFPYYSKLKHESICNFRPYNCPYAGSDCSVVGDIPYLVAHLRDDHRVDMHSGCTFNHRYVKSNPVEVENATWMLTVFHCFGQYFCLHFEAFQLGMAPVYMAFLRFMGDEREARSYCYSLEIGGNGRKQIWEGSPRSIRDSHKKVRDSHDGLIVYRNMALFFSGGDRKELKLRVTGRIWKEQQNPEGGVCIPTLCS | 316 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Lele42g1137 | 316 | FunFam | E3 ubiquitin-protein ligase SINAT3 | 104 | 162 | - | - | |
Lele42g1137 | 316 | CDD | Sina | 168 | 296 | - | - | |
Lele42g1137 | 316 | Gene3D | Zinc/RING finger domain, C3HC4 (zinc finger) | 13 | 106 | IPR013083 | - | |
Lele42g1137 | 316 | CDD | RING-HC_SIAHs | 52 | 90 | - | - | |
Lele42g1137 | 316 | Pfam | Seven in absentia protein family | 96 | 295 | IPR018121 | GO:0005737|GO:0006511|GO:0007275 | |
Lele42g1137 | 316 | ProSiteProfiles | Zinc finger RING-type profile. | 54 | 90 | IPR001841 | - | |
Lele42g1137 | 316 | FunFam | E3 ubiquitin-protein ligase SINAT5-like | 163 | 295 | - | - | |
Lele42g1137 | 316 | Gene3D | Apoptosis, Tumor Necrosis Factor Receptor Associated Protein 2; Chain A | 170 | 295 | IPR008974 | GO:0005515 | |
Lele42g1137 | 316 | ProSiteProfiles | Zinc finger SIAH-type profile. | 107 | 167 | IPR013010 | GO:0008270 | |
Lele42g1137 | 316 | PANTHER | E3 UBIQUITIN PROTEIN LIGASE SIAH | 37 | 301 | - | - | |
Lele42g1137 | 316 | SUPERFAMILY | RING/U-box | 48 | 94 | - | - | |
Lele42g1137 | 316 | Gene3D | Zinc/RING finger domain, C3HC4 (zinc finger) | 107 | 162 | IPR013083 | - | |
Lele42g1137 | 316 | SUPERFAMILY | TRAF domain-like | 107 | 299 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Lele42g1137 | Lele-ChrLele42 | 23758429 | 23761002 | Dispersed/Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Lele42g1137 | 3 | 302 | C3H Transcription Factor Family | AT2G41980 | 69.205 | 4.01e-157 | 439 |