Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele42g1126 ATGGCACATCTGGGCTGTAATCTCAGAGGCCCGACCAGTTCTCCGGCGGATACAGGTTTGGAAGACGACGATCTGTATACAGAGTTATGGAAGTTATGCGCTGGGCCTCTGGTGGATGTTCCTCGAACTGGGGAGAGAGTTTTTTACTTCCCTCAGGGTCACATGGAACAATTGCAAGCATCAACGAATCAGGAATTGAACCAACAAATTCCCCATTTCAACATTTCTTCTAAGATTCTATGCCGTGTTATGCACATTCAGTTATTGGCGGAACCAGACACTGATGAAGTTTATGCTCGTATTACTTTGCTTCCAGAATCAGATCAAACTGAGCCTACCAGCTCTGATCCATGTCCACCAGAGACTCGGACGCAGGCTTTTCATTCATTTTGCAAAATACTAACAGCATCTGATACTAGCACTCATGGAGGATTTTCAGTTCTGCGAAAGCATGCTAATGAGTGCTTGCCTCAATTGGACATGACCCAAGCAACCCCTACTCAGGAGTTAGCAGCAAAGGATCTTCATGGGTTTGAGTGGAAGTTTAAGCATATATTCAGAGGTCAACCAAGGAGACACTTGCTTACAACTGGTTGGAGTACATTTGTCACTTCCAAAAGATTGGTAGCTGGAGACGCATTCGTGTTTTTGAGGGGAGAGAATGGAGAACTGAGAGTTGGTGTCCGGCGCCTTGCCCGGCAACAGAGTCCGATGCCTTCGTCGGTGATATCAAGCCAGAGCATGCATCTTGGAGTGCTTGCCACTGCTTCCCATGCTGTTGCCACTCGTACCATGTTTGTAGTTTACTACAAACCAAGGACTAGACAGTATATTATTGGTTTAAACAAATACCTGGCGGCGATCAACAATAAGTTCACAGTTGGCATGCGTTTCAAGATGAGATTTGAGGGAGATGATTCGCCTGAGAGAAGGTTTTCGGGAACTATTGTTGGTGTTGGCGATTTATCTCAAGAGTGGCCCGACTCAAAGTGGCGGTCATTGAAGGTGCAATGGGATGAGCAAGCAACAATCCCAAGGCCAGAGAGGGTTTCTCCCTGGGAGATTGAACCTTTTGTTGCTTCTGCACCTGTAAATCTCGTTCAACCAGCCGTAAAGAGCAAAAGATCTCGCCCTGCTGATGTTCCATCTTCTGAAATGGTTTCCAATTCAGCTGCTTCAGCTTTCTGGTATCAGGGGTCATCCCAGTCCCATGAACTTGCTCAATTAGGTGGCGCAACAGAAGCCCAAAGTAATGAAAACCAGGTTTTATGGAGCATAAGGCAGAACACCCACATTAATGGCAATGCGATGAACAACAGTAACTCCTGCAACGCCAGAGTTCGGGTAGAAGGAGCGTGGCCTCCATCACATTTGAACATCTCTTCAAACTGTTGTCCTGACCCCAAAAACAACAAATCTGTTGCAGTTCAACAATCTTCTATCTCTTGCTGGCCAAATGATGCTCCTCCAGCATATGATCAAGTTGAGAATGGGAAGAAATCCGAGAATCCCGTGGGTTGCCGGCTATTTGGTGTCAATTTGACTAACAACTCTAACAATGTTGCTCCTCCAGAGAAAGAGTCAAGAGGCTGCACTGCTAGTCCTAGTGGGTCCAAAGAATCTATTCCTGTTGCAGCATGTGAAACTAAGACAAGTCAGAACCCCAATTGTTCAGTATCCAGAAAGGAGCAGAAGCAAGAAACATCTAATGCATCGCCAAATGAGAGGCAGAGCAAGCAGGCATCTTTACCATCCATGAGGACTCGCACGAAGGTACAAATGCAAGGAGTGGCTGTTGGTCGCGCTGTTGACTTGACTATGTTGAATGGCTACAACAGTCTGATTGAAGAGCTCGAAAGGTTGTTCGACATTAAAGGAGAGCTTCGTACGCAGGACAAATGGAAGGTTACTTTCATAGATGATGAGAATGAGAGGATGCTCATGGGCGATGATCCGTGGCCGGAGTTTTGTAAAATGGTGAAGAGGATTACCATATATTCAAGCGAGGAATTGAAGAAGATGAATGCAACATGCCCGGTTCCTGCATCTTCATCAGAGGATGATGAAGCTCTGATCACTGTGAATTCACAGAATAAGGATGAAAGTCAGTAA 2112 0.4588 MAHLGCNLRGPTSSPADTGLEDDDLYTELWKLCAGPLVDVPRTGERVFYFPQGHMEQLQASTNQELNQQIPHFNISSKILCRVMHIQLLAEPDTDEVYARITLLPESDQTEPTSSDPCPPETRTQAFHSFCKILTASDTSTHGGFSVLRKHANECLPQLDMTQATPTQELAAKDLHGFEWKFKHIFRGQPRRHLLTTGWSTFVTSKRLVAGDAFVFLRGENGELRVGVRRLARQQSPMPSSVISSQSMHLGVLATASHAVATRTMFVVYYKPRTRQYIIGLNKYLAAINNKFTVGMRFKMRFEGDDSPERRFSGTIVGVGDLSQEWPDSKWRSLKVQWDEQATIPRPERVSPWEIEPFVASAPVNLVQPAVKSKRSRPADVPSSEMVSNSAASAFWYQGSSQSHELAQLGGATEAQSNENQVLWSIRQNTHINGNAMNNSNSCNARVRVEGAWPPSHLNISSNCCPDPKNNKSVAVQQSSISCWPNDAPPAYDQVENGKKSENPVGCRLFGVNLTNNSNNVAPPEKESRGCTASPSGSKESIPVAACETKTSQNPNCSVSRKEQKQETSNASPNERQSKQASLPSMRTRTKVQMQGVAVGRAVDLTMLNGYNSLIEELERLFDIKGELRTQDKWKVTFIDDENERMLMGDDPWPEFCKMVKRITIYSSEELKKMNATCPVPASSSEDDEALITVNSQNKDESQ 703
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele42g1126 703 ProSiteProfiles B3 DNA-binding domain profile. 130 232 IPR003340 GO:0003677
Lele42g1126 703 MobiDBLite consensus disorder prediction 678 703 - -
Lele42g1126 703 Gene3D - 291 363 - -
Lele42g1126 703 PANTHER AUXIN RESPONSE FACTOR 4-RELATED 24 675 IPR044835 GO:0003677|GO:0006355|GO:0009725
Lele42g1126 703 FunFam Auxin response factor 291 362 - -
Lele42g1126 703 Pfam B3 DNA binding domain 130 230 IPR003340 GO:0003677
Lele42g1126 703 Pfam Auxin response factor 256 335 IPR010525 GO:0003677|GO:0005634|GO:0006355|GO:0009725
Lele42g1126 703 MobiDBLite consensus disorder prediction 1 20 - -
Lele42g1126 703 Pfam AUX/IAA family 561 623 IPR033389 -
Lele42g1126 703 ProSiteProfiles PB1 domain profile. 587 668 IPR000270 GO:0005515
Lele42g1126 703 SMART B3_2 130 232 IPR003340 GO:0003677
Lele42g1126 703 FunFam Auxin response factor 582 675 - -
Lele42g1126 703 SUPERFAMILY DNA-binding pseudobarrel domain 121 259 IPR015300 -
Lele42g1126 703 MobiDBLite consensus disorder prediction 516 591 - -
Lele42g1126 703 CDD B3_DNA 128 230 IPR003340 GO:0003677
Lele42g1126 703 SUPERFAMILY CAD & PB1 domains 583 665 - -
Lele42g1126 703 Gene3D - 127 231 IPR015300 -
Lele42g1126 703 FunFam Auxin response factor 128 232 - -
Lele42g1126 703 Gene3D - 583 675 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele42g1126 Lele-ChrLele42 23663035 23667252 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele42g1126 25 674 B3 DNA Binding Superfamily AT4G23980 56.109 0.0 674
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF B3-ARF Lele42g1126 AUX_IAA 2.5e-06 CL0072