Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele42g1122 ATGAACTATCTGAGACCAGACATAAAGAGAGGAAACATAACTCCTGAAGAAGACGACCTTATCATCAGAATGCACTCTCTCATCGGAAACCGCTGGTCTCTCATCGCAGGCAGGTTACCAGGACGAACAGATAACGAAATCAAGAACTACTGGAACACTCATCTCAGCAAAAGAGTCAAAGCATCTCAACAATCAGGACCTGGTGATCATCATCAACCAAGAGAGAAGAATACGAAGAAGAAGAAGAAGAAGCCCACTACAAAAAATAACAACAGTAAAAACAAATCCATCAACAGTGATAATGTGGAGGAAGAAGAAGCAGAGAAGAAGACAAATGTATATCTTCCGAAACCAATGAGGGTTAGGGCTTTACATATGAACGAAGATTCTAAGAACTTTTCTTCTTCAGCAAGTGGATCTTCAAGCCAGGAGTTGTTACAGAAGGAAGATATGGATGTGATGAGTTATGAGCCATGGGGTGAAAACGACGTGTTTGGGTTCTTTGTTGAGGAAGATCAGAATATTGACAGAGTCAACGGCTCAATATCAGAAGAAAATATTAATATTAATATGAAAAATAATGATATGGAATGCGAGTCACTGGAGAGGCTATATGAAGAGTATTTGCAGCTCTTAAAGGATGATAATGTTATTAGTGATGAAAACCAAGGGCAATTGGATTCTTTTGCCCAATCTTTGTTTCTCTGA 708 0.3898 MNYLRPDIKRGNITPEEDDLIIRMHSLIGNRWSLIAGRLPGRTDNEIKNYWNTHLSKRVKASQQSGPGDHHQPREKNTKKKKKKPTTKNNNSKNKSINSDNVEEEEAEKKTNVYLPKPMRVRALHMNEDSKNFSSSASGSSSQELLQKEDMDVMSYEPWGENDVFGFFVEEDQNIDRVNGSISEENININMKNNDMECESLERLYEEYLQLLKDDNVISDENQGQLDSFAQSLFL 235
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele42g1122 235 Gene3D - 14 113 - -
Lele42g1122 235 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 5 59 IPR017930 -
Lele42g1122 235 PANTHER TRANSCRIPTION FACTOR MYB8-RELATED-RELATED 1 171 - -
Lele42g1122 235 SUPERFAMILY Homeodomain-like 1 63 IPR009057 -
Lele42g1122 235 MobiDBLite consensus disorder prediction 98 115 - -
Lele42g1122 235 MobiDBLite consensus disorder prediction 58 119 - -
Lele42g1122 235 Pfam Myb-like DNA-binding domain 10 55 IPR001005 -
Lele42g1122 235 SMART sant 9 57 IPR001005 -
Lele42g1122 235 MobiDBLite consensus disorder prediction 75 89 - -
Lele42g1122 235 ProSiteProfiles Myb-like domain profile. 5 55 IPR001005 -
Lele42g1122 235 CDD SANT 14 55 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele42g1122 Lele-ChrLele42 23634653 23635360 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele42g1122 2 67 MYB Transcription Factor Family AT5G52600 72.727 1.94e-31 112
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Lele42g1122 Myb_DNA-binding 4.4e-14 CL0123