Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele42g1117 ATGGATTCTGGGGTTGAATCGTCAGAAAACGATGGAACAGGGAAAAAGGAGCATGCTCGGTTCGAGGAGGATTTTGCAGAGAAAGACCCAACTGGCCGATATATCCGGTACAATGAAATCTTAGGCAAGGGTGCTTTCAAGACTGTTTATAGGGCCTTCGATGAAGTTGATGGAATCGAAGTTGCTTGGAACCAAGTTAGGATCGATGACCTTTTGCAGTCAGCAGTAGATCTAGCAAAACTGTACTCTGAAGTTCACATACTGAAGTCTTTGAAACATGAAAATATTATGAAGTTCTATCATTCCTGGGTTGATGATAAGAACAAAACTGTTAACATGATCACTGAGCTCTTCACGTCAGGAACTTTAAGACAATACCGTAGGAAGCATAAAAATGTCGACATGAAGGCCATCAAAGGTTGGGCTAGGAAGATTCTCCAAGGTTTAGCCTACATCCATCGTCAAAAGCCTCCTATTATTCATAGAGACTTGAAATGTGACAACATTTTTGTGAATGGAAACCATGGAGAAATTAAGATAGGAGACCTAGGCTTGGCGACTGTGATGCAGCAACCAGTTGCTCGAAGTGTCATCGGGACTCCTGAATTTATGGCTCCTGAGCTTTATGAAGAGGAATACAATGAGCTTGTTGACATCTATTCTTTTGGGATGTGCATACTAGAGATGGTTACTTTTGAGTATCCCTATAGTGAATGCAAAAATCCAGCTCAAATCTATAAGAAAGTTACCTCTGGTATCAAGCCTGCTTCTCTTAATAAGGTAAATGACCCCAAAATTAGAGAGTTTATTGACAAATGTTTGGTTCCAGCGTCTCAGAGATCGTCTGCGGAGGAGCTTCTCAAAGACCCATTTCTGCAAGTTGAGAATCCAAAGAATCCAGTCCGAGATCCTTTACAGCTGCCTCCTCCTCAAACTCCAAGATCCATAGATTTGTCCAGGTCTGGTCCTTTATCTATGGACATAGATGCTGATTATAGACTGATTTCTGTGAGTACCTGTGCTGAAAGCCAATGTGGAAGTCCTCACTCTCCAGTTCAAGAATTCCAGAGGATATCTGAGGAGAATGAATTTAGGTTGAAAGGGACAAAAAATGATGATAGATCAGTATCGTTGACCTTGCGTATTGCGGATTCCTCTGGTCGAGTAAGGAATATACATTTTCTCTTTTATCTTGATTCAGACACTGCAGTCTCAGTGGCCTCAGAGATGGTTGAACAACTAGAGTTAGCAGAACATGATGTGACCTTCATCGCCGGGCTTATCGATCATGTGATAACAAAACTTCTACCTGGCTGGAAACCATCATCTGATTATTTCTCAAGTGAAGTAACAAGCCTCAATGGTGGGTCTTCAACACTTGTAGATGGCCAGACCCAAACAAGTTTATGGGATTCCATCCTAACTAGTGATGCTGCTGGACTAGTTATGTACCAAGACTATGTGTTAGGGCCGATTACTGTTGATCAAAGCGATGATGTTACACATGAGGAGGGCTGCTTGCTGGCTGACACTGTTAATAATGCTACTTTTCATGGTGAGTGTAATTCTTCTTCCACTTTGGCTGACTTGGAATATCAATATTCCCAAGGATCCGGAACCTATGCGCTGGTTGCTAAAGATTCGTCGATAAAAGTTGACAACTTTCTCGATTTCGATGGGAGCTCTAAATCCTTGAGTTGGTCTCTCTGTGAACTGGATCTTGGGGATACATATCTTGAGGCTGGCAAATTGCAGAGAACAACAGATAACAGTGTGGGGGAAGGCATTGTGACAAACAACTTTATGAAGAATGAAACGATTCCATCATTTAATGGAACATATAATGCTTTTAGCTTGACAAGCAGCTGTTCTTCTCTGTCTTTAGCGGAGGAGAACGCAGATTCTGAGCTGAAGTTGGAAATTGATGCAATTGAGGCTTTCTATCGCAAACAGTTTCAAGAACTTTCTAGAAGGAAGTTGACGCATTTGGATCTCATCAGAAAGAGATGGATGGCTAAGAAGAAATTGGCTGTTCATTGA 2040 0.4172 MDSGVESSENDGTGKKEHARFEEDFAEKDPTGRYIRYNEILGKGAFKTVYRAFDEVDGIEVAWNQVRIDDLLQSAVDLAKLYSEVHILKSLKHENIMKFYHSWVDDKNKTVNMITELFTSGTLRQYRRKHKNVDMKAIKGWARKILQGLAYIHRQKPPIIHRDLKCDNIFVNGNHGEIKIGDLGLATVMQQPVARSVIGTPEFMAPELYEEEYNELVDIYSFGMCILEMVTFEYPYSECKNPAQIYKKVTSGIKPASLNKVNDPKIREFIDKCLVPASQRSSAEELLKDPFLQVENPKNPVRDPLQLPPPQTPRSIDLSRSGPLSMDIDADYRLISVSTCAESQCGSPHSPVQEFQRISEENEFRLKGTKNDDRSVSLTLRIADSSGRVRNIHFLFYLDSDTAVSVASEMVEQLELAEHDVTFIAGLIDHVITKLLPGWKPSSDYFSSEVTSLNGGSSTLVDGQTQTSLWDSILTSDAAGLVMYQDYVLGPITVDQSDDVTHEEGCLLADTVNNATFHGECNSSSTLADLEYQYSQGSGTYALVAKDSSIKVDNFLDFDGSSKSLSWSLCELDLGDTYLEAGKLQRTTDNSVGEGIVTNNFMKNETIPSFNGTYNAFSLTSSCSSLSLAEENADSELKLEIDAIEAFYRKQFQELSRRKLTHLDLIRKRWMAKKKLAVH 679
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele42g1117 679 FunFam probable serine/threonine-protein kinase WNK9 118 297 - -
Lele42g1117 679 FunFam Probable serine/threonine-protein kinase WNK1 20 116 - -
Lele42g1117 679 ProSiteProfiles Protein kinase domain profile. 35 292 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele42g1117 679 Pfam Oxidative-stress-responsive kinase 1 C-terminal domain 376 432 IPR024678 GO:0004674|GO:0005524
Lele42g1117 679 MobiDBLite consensus disorder prediction 286 320 - -
Lele42g1117 679 MobiDBLite consensus disorder prediction 1 23 - -
Lele42g1117 679 Gene3D - 374 448 - -
Lele42g1117 679 SUPERFAMILY Protein kinase-like (PK-like) 29 317 IPR011009 -
Lele42g1117 679 MobiDBLite consensus disorder prediction 9 23 - -
Lele42g1117 679 SMART serkin_6 35 292 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele42g1117 679 CDD STKc_WNK 33 292 - -
Lele42g1117 679 PANTHER SERINE/THREONINE-PROTEIN KINASE WNK WITH NO LYSINE -RELATED 16 491 - -
Lele42g1117 679 Gene3D Transferase(Phosphotransferase) domain 1 118 297 - -
Lele42g1117 679 Pfam Protein kinase domain 38 292 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele42g1117 679 ProSitePatterns Serine/Threonine protein kinases active-site signature. 159 171 IPR008271 GO:0004672|GO:0006468
Lele42g1117 679 Gene3D Phosphorylase Kinase; domain 1 19 116 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele42g1117 Lele-ChrLele42 23588872 23591956 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele42g1117 22 436 MAP Kinase Kinase Kinase AT5G41990 63.373 0.0 525
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK WNK_NRBP Lele42g1117 Pkinase 1.8e-51 CL0016