Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele42g1099 ATGAATGACGATCGTGCGGGTGTTGATTCTGAAAACAAAGGAAAGTTTGCAGAGAGAGAGATGGGTGGTGGAGATATCAAGAGCCTGAAGAGCTTCCAGTTCCGACATAATCATCATCATCATGGGAAGAGTCAGAGACAACAACAGGGGGTTCCGAAAGGGTGCTTGGCGATAAAGGTGGGACAAGAAGGAGAAGAACAAGAGAGATTTGTTGTGCCCGTGTTGTACTTCAATCATCCATTGTTCTTGCAGCTTCTTAAGGAGGCCGAAGCGGTTTATGGCTTCGATCAGAAGGGGACAATCACCATACCTTGCCACGTCGAAGAGTTTCGGACCGTACGAAGATTGATCGACAGAGAGAAGTCATTTCATCGTCCCCAACACTATCATCATCAGCCCCACCATCATATTGGCTGTTTTGGCTTCTAA 429 0.4685 MNDDRAGVDSENKGKFAEREMGGGDIKSLKSFQFRHNHHHHGKSQRQQQGVPKGCLAIKVGQEGEEQERFVVPVLYFNHPLFLQLLKEAEAVYGFDQKGTITIPCHVEEFRTVRRLIDREKSFHRPQHYHHQPHHHIGCFGF 142
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele42g1099 142 PANTHER AUXIN-INDUCED PROTEIN-LIKE-RELATED 43 112 IPR003676 GO:0009733
Lele42g1099 142 MobiDBLite consensus disorder prediction 1 24 - -
Lele42g1099 142 MobiDBLite consensus disorder prediction 33 52 - -
Lele42g1099 142 Pfam Auxin responsive protein 38 116 IPR003676 GO:0009733
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele42g1099 Lele-ChrLele42 23445160 23445880 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele42g1099 51 137 Calmodulin-binding Proteins AT5G20810 39.773 2.22e-15 67.8