Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele42g1098 ATGGGCCAGTGCTACGGCAAGACCAATCCCGCCGCTGAAAATGACGGTGCCGCAAATACAACCGCTATTATAGCCGATTCCGGTGGCCAGCCGCAGTCGCCGCTGCCGTCAGGGAGCGGGGGCAACGGTTTTCCGTCGGTGAAGAACACACCTGCCCGGTCGTCCAACGCGAGTCCATGGCCGAGCCCGTACCCGCAAGGTGTCAACGCGAGCCCGTTTCCGGGTGGGGTGTCGCCCTCGCCGGCGAGGACATCGACGCCCAGGAGGTTTTTTCGACGACCGTTCCCTCCTCCGTCGCCGGCAAAGCATATAAGAGCGTCGTTGGCCAAGCGGCTTGGTCATGGGAAACCCAAGGAGGGCCCGATCCCCGAGGACCGCGGGACGGAACCGGAGCAGGCGCTGGACAAGAGCTTTGGGTATAGTAAGAATTTTGGAGCTAAGTATGACTTAGGAAATGAAGTGGGAAGGGGCCATTTTGGCCATACGTGCTCTGCAAGGGGCAAGAAGGGAGAGCTCAAAGACCATCCTGTAGCAGTGAAAATCATCTCGAAGGAGAAGATGACAACAGCAATAGCCATCGAAGATGTTCGGAGAGAGGTGAAGATATTGAAAGCTCTATCTGGCCATAAGCATCTTGTCAAGTATCATGATGCTTGTGAGGATGCCAACAATGTGTACATAGTTATGGAATTGTGTGAAGGGGGGGAGCTTCTTGACAGAATTTTGTCAAGGGGAGGGAGGTATACCGAGGAGGATGCAAAAGTTATAGTTTTGCAGATTTTAAGTGTTGTTTCTTTTTGTCATCTTCAAGGTGTTGTGCACCGTGATCTAAAACCTGAGAATTTTCTGTTCGCTTCACGAAGTGAAGATGCTGATATGAAGCTTATTGATTTTGGTCTCTCTGACTTCATTAGACCAGATGAAAGATTGAATGACATCGTTGGAAGTGCCTACTATGTTGCGCCTGAGGTCCTTCACAGATCCTATAGTCTGGAAGCTGATATATGGAGTATAGGTGTTATCACCTATATCTTGTTATGTGGAAGTCGACCTTTCTGGGCTCAAACAGAATCCGGAATATTTCGTGCAGTGCTCAGAGCAGATCCAAATTTTGATGATTTGCCATGGCCTACTGTATCTGCAGAGGCCAAGGACTTTGTAAAAAGGCTGTTGAACAAGGACTACAGGAAAAGAATGACTGCTGTCCAAGCTCTAACTCACCCTTGGCTGAGGGATGACAACCGTCCTATACCTTTAGATATATTAGTTTACAAATTAGTGAAGTCTTATCTTCATACAACGCCATTCAAACGAGCAGCACTAAAGGCCCTTGCAAAAGCCTTGTCAGAAGATCAATTAGTGTATCTCAGAGCACAATTCAGATTGTTAGAACCAAACAAAGACGGCTATGTCTCCCTTGATAACTTCAAAATGGCTCTTGTACGTAATTCAACAGATGCCATCAGTGAGTTGAGGGTTCTAGATATTATACCTTCGATGGAACCGCTTGCCTATAGGAAGATGAACTTTGGAGAATTTTGCGCAGCTGCAATCAGCACATACCAATTAGAGGCACTTGACACGTGGGAGCACATTGCCTCCACTGCTTTTGAGCATTTCGAGAGAGAGGGCAACCGAGTGATATCGGTCGAAGAATTAGCAAGAGAGTTGAATCTTGGTCCTTCGGCTTATTCAATTATCAGAGATTGGATACGAAATACTGATGGAAAGCTTAGTTTACTTGGATACACAAAATTTTTGCATGGTGTTACACTGCGTAGTTCAAACACAAGACGCCATTAG 1803 0.4737 MGQCYGKTNPAAENDGAANTTAIIADSGGQPQSPLPSGSGGNGFPSVKNTPARSSNASPWPSPYPQGVNASPFPGGVSPSPARTSTPRRFFRRPFPPPSPAKHIRASLAKRLGHGKPKEGPIPEDRGTEPEQALDKSFGYSKNFGAKYDLGNEVGRGHFGHTCSARGKKGELKDHPVAVKIISKEKMTTAIAIEDVRREVKILKALSGHKHLVKYHDACEDANNVYIVMELCEGGELLDRILSRGGRYTEEDAKVIVLQILSVVSFCHLQGVVHRDLKPENFLFASRSEDADMKLIDFGLSDFIRPDERLNDIVGSAYYVAPEVLHRSYSLEADIWSIGVITYILLCGSRPFWAQTESGIFRAVLRADPNFDDLPWPTVSAEAKDFVKRLLNKDYRKRMTAVQALTHPWLRDDNRPIPLDILVYKLVKSYLHTTPFKRAALKALAKALSEDQLVYLRAQFRLLEPNKDGYVSLDNFKMALVRNSTDAISELRVLDIIPSMEPLAYRKMNFGEFCAAAISTYQLEALDTWEHIASTAFEHFEREGNRVISVEELARELNLGPSAYSIIRDWIRNTDGKLSLLGYTKFLHGVTLRSSNTRRH 600
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele42g1098 600 Gene3D - 418 590 - -
Lele42g1098 600 MobiDBLite consensus disorder prediction 112 132 - -
Lele42g1098 600 MobiDBLite consensus disorder prediction 1 136 - -
Lele42g1098 600 ProSiteProfiles Protein kinase domain profile. 148 410 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele42g1098 600 FunFam Calcium-dependent protein kinase SK5 320 415 - -
Lele42g1098 600 FunFam CDPK-related kinase 3 140 312 - -
Lele42g1098 600 Gene3D Transferase(Phosphotransferase) domain 1 237 417 - -
Lele42g1098 600 ProSitePatterns Protein kinases ATP-binding region signature. 154 180 IPR017441 GO:0005524
Lele42g1098 600 ProSitePatterns Serine/Threonine protein kinases active-site signature. 272 284 IPR008271 GO:0004672|GO:0006468
Lele42g1098 600 SUPERFAMILY EF-hand 436 589 IPR011992 -
Lele42g1098 600 Pfam Protein kinase domain 149 410 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele42g1098 600 SMART serkin_6 148 410 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele42g1098 600 MobiDBLite consensus disorder prediction 13 64 - -
Lele42g1098 600 ProSiteProfiles EF-hand calcium-binding domain profile. 451 486 IPR002048 GO:0005509
Lele42g1098 600 Gene3D Phosphorylase Kinase; domain 1 141 236 - -
Lele42g1098 600 FunFam CDPK-related kinase 1 141 236 - -
Lele42g1098 600 FunFam CDPK-related kinase 1 446 518 - -
Lele42g1098 600 PANTHER SERINE/THREONINE-PROTEIN KINASE 132 575 - -
Lele42g1098 600 SUPERFAMILY Protein kinase-like (PK-like) 147 435 IPR011009 -
Lele42g1098 600 CDD STKc_CAMK 147 409 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele42g1098 Lele-ChrLele42 23434092 23439598 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele42g1098 1 594 EF-hand Containing Proteins AT3G50530 57.595 0.0 715
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CDPK Lele42g1098 Pkinase 1.8e-68 CL0016