Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele42g1085 ATGGGGAAGAAGGGACGTACCTCCTGGTTGACCGCTGTGAAAAGGGCATTTAGATCTCCAACCAAAGACCCTGACAAAAGGAACCAGGAAGAAGACGAAGACAAGAAGAGAGAAAACCGGCGATGGATTTTCAGAAAAACAGCGAATCAGGACGCGGCGACTATCCAGCACACCCCGACAAAGCAGAACCCCGATACGGCTGCCATGACTGTTGTTCCCGTACCTGTGCCGACGGTGACGGCGTCGGTGACAGATCAGAACCATGCGTTTGCCGCGGCGGTAGCGAAGGCTGAAGCGGCCATGATCACCACTCAGGCAGCGGTGGAAGCTGCTAGATTGAAGAGGCCTTCAAATCTAGCCAGGGAGCACTATGCTGCTACGGTGATTCAAACTGCTTTCAGAGGATACCTTATTTCTTTCACTTTCAAGGCAAGGAGGGCACTTCGAGCTCTGAAAGGGCTGGTGAAATTGCAAGCTTTGGTGAGGGGTCATAATGTTCGGAAGCAGGCAAAAATGACCCTTCGGTGCATGCAGGCTCTAGTTCGAGTGCAAGCCAGAGTGCTTGATCAGCGCTCGAGGTTTTCGCACGAGACCAGTAGTAGAAAATCCACATTCAGTGACACCAACAGCGTTTGGGAGTCGCGGTATCTTCAGGGTATTTCAGATTGGAGATCAATGTCAAGAGAAGGAAGCAGTATTGCAGACGACTGGGATGAACGCCCACACACAGTTGAGGAAGTTAAAGCCATGTTGCAGCAGAGGAAAGAAGCAGCAGCTATGAAGCGTGGCAAGTCATTGTCTCACGCTTTCTCGCAACAGCTTTCGAGAAATGGTTGGAACTCATCGATTGAAAATGAAGATGAACTGGAAGAGAGACCGAAATGGCTGGACCGGTGGATGGCTTCAAAGCCATGGGAGAGGGAAACGAGAGGAAGGGCTTCGACTGATCAGAGAGACACCATTAAAACTGTAGAAATGGACATTTCTCAGCCTTACTCATATCTGGGATCTAACTACAGAAGATCACATCCAAATTATCAATATAACCCACACCAACCCCAGAGACATTCAGTGGCTTCCCCACTCCACAGAAGCCACCAAAATAGTTCTCTCCATCAATCTCCTGCAACCCCATCTCCTGCAAAATCAAGGCCTATCCAAGTCCGGTCTGCAAGCCCTCGATGTGGTAGGGAAGATAGAAGCTACCATACATCTCAAACCCCAAGTTTGAGGTCCAATTACCATTATTCTGGAAGCATGTACCAAAATGGAAGGGTTGTAACAAGCATCAGTGGTGGGGGTACATTGCCTAATTACATGGCGGCAACTGAGTCTGCAAAGGCCCGAGTTCGGTCTCAGAGCGCGCCAAGGCAGAGGCCATTGACACCGGAGAGGGACAGAGCAGGATCAGTAGCAAAGAAGAGGCTTTCATTTCCTAATGCTCCGGACCCTTGTGCTATTGCAATGGGTTATGGAAATTATGGGCATAGTTTAAGAAGTCCAAGCTTCAAGAGCGTGGGTGCTTCACACTTTGGGTTGGAGCAGCAATCCAACTATTCTTCTTGCTACACTGAGAGTCTTGGTGGCGAGATTTCTCCATCTTCAACGAGTGATCTTAGAAGGTGGTTGAGATGA 1635 0.4942 MGKKGRTSWLTAVKRAFRSPTKDPDKRNQEEDEDKKRENRRWIFRKTANQDAATIQHTPTKQNPDTAAMTVVPVPVPTVTASVTDQNHAFAAAVAKAEAAMITTQAAVEAARLKRPSNLAREHYAATVIQTAFRGYLISFTFKARRALRALKGLVKLQALVRGHNVRKQAKMTLRCMQALVRVQARVLDQRSRFSHETSSRKSTFSDTNSVWESRYLQGISDWRSMSREGSSIADDWDERPHTVEEVKAMLQQRKEAAAMKRGKSLSHAFSQQLSRNGWNSSIENEDELEERPKWLDRWMASKPWERETRGRASTDQRDTIKTVEMDISQPYSYLGSNYRRSHPNYQYNPHQPQRHSVASPLHRSHQNSSLHQSPATPSPAKSRPIQVRSASPRCGREDRSYHTSQTPSLRSNYHYSGSMYQNGRVVTSISGGGTLPNYMAATESAKARVRSQSAPRQRPLTPERDRAGSVAKKRLSFPNAPDPCAIAMGYGNYGHSLRSPSFKSVGASHFGLEQQSNYSSCYTESLGGEISPSSTSDLRRWLR 544
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele42g1085 544 MobiDBLite consensus disorder prediction 306 325 - -
Lele42g1085 544 MobiDBLite consensus disorder prediction 49 66 - -
Lele42g1085 544 Gene3D - 120 181 - -
Lele42g1085 544 MobiDBLite consensus disorder prediction 402 416 - -
Lele42g1085 544 Pfam IQ calmodulin-binding motif 125 137 IPR000048 GO:0005515
Lele42g1085 544 Pfam IQ calmodulin-binding motif 155 171 IPR000048 GO:0005515
Lele42g1085 544 MobiDBLite consensus disorder prediction 334 416 - -
Lele42g1085 544 MobiDBLite consensus disorder prediction 18 45 - -
Lele42g1085 544 SMART iq_5 149 171 IPR000048 GO:0005515
Lele42g1085 544 SMART iq_5 121 143 IPR000048 GO:0005515
Lele42g1085 544 MobiDBLite consensus disorder prediction 524 544 - -
Lele42g1085 544 ProSiteProfiles IQ motif profile. 152 179 IPR000048 GO:0005515
Lele42g1085 544 MobiDBLite consensus disorder prediction 444 476 - -
Lele42g1085 544 ProSiteProfiles IQ motif profile. 122 150 IPR000048 GO:0005515
Lele42g1085 544 MobiDBLite consensus disorder prediction 334 386 - -
Lele42g1085 544 MobiDBLite consensus disorder prediction 1 66 - -
Lele42g1085 544 Pfam Protein of unknown function (DUF4005) 392 492 IPR025064 -
Lele42g1085 544 MobiDBLite consensus disorder prediction 306 323 - -
Lele42g1085 544 PANTHER IQ-DOMAIN 5-RELATED 1 480 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele42g1085 Lele-ChrLele42 23330505 23332606 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele42g1085 9 544 IQD Protein Family AT4G00820 57.713 8.51e-177 508