Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele42g1080 ATGAAAAAGTGTCAAGAACCATGTGGGGGAAGGAAGATCAGAGACCAGCCTGAAAAGAAGAAGAAGAACAAGAATCCAAGGATTTCAGCATCTCAGCATGGAAACAACATTTCATTGATGGGATATTTGACAGGAGAAATTCTTAAGGAGCATCCAATGAGACACAGAGGCCTCTCTCTTGCTGAGAAGATCTCCACCTTGGTGAAAGCCGCAAATGTTGATGTTGAATCTTATTGGCCAAGCTTATTTGCTAAGCTTGCTGAGAAGCGAGACCTTGGGGATCTGATCTTGAATGCTGGGGGTGGTGGGGCTCCGGTTGCAGTTGCCGCTGCTCCAGCTGCCGCTGGTGGTGCTGCTCCCGCAGCTGCTCCTGCTGCTGAGGAGAAGAAGAAGGAAGAACCCCAAGAAGAGAGCGACGATGACATGGGCTTCAGCTTGTTTGATTAG 447 0.4899 MKKCQEPCGGRKIRDQPEKKKKNKNPRISASQHGNNISLMGYLTGEILKEHPMRHRGLSLAEKISTLVKAANVDVESYWPSLFAKLAEKRDLGDLILNAGGGGAPVAVAAAPAAAGGAAPAAAPAAEEKKKEEPQEESDDDMGFSLFD 148
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele42g1080 148 MobiDBLite consensus disorder prediction 1 35 - -
Lele42g1080 148 Pfam 60s Acidic ribosomal protein 61 147 - -
Lele42g1080 148 MobiDBLite consensus disorder prediction 117 148 - -
Lele42g1080 148 CDD Ribosomal_P1 61 98 - -
Lele42g1080 148 Gene3D - 29 100 IPR038716 -
Lele42g1080 148 FunFam 60S acidic ribosomal protein P2 60 100 - -
Lele42g1080 148 Hamap 50S ribosomal protein L12 [rpl12]. 53 148 IPR027534 GO:0003735|GO:0005840|GO:0006414
Lele42g1080 148 MobiDBLite consensus disorder prediction 1 25 - -
Lele42g1080 148 PANTHER 60S ACIDIC RIBOSOMAL PROTEIN P1 61 148 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele42g1080 Lele-ChrLele42 23268063 23272698 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele42g1080 61 148 Cytoplasmic Ribosomal Protein Gene Family AT5G24510 52.273 1.69e-25 92.0