Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele42g1074 ATGTGCGTAATTTGTCCAACAGATTTGTGGATTTTGCGGAAATTGAGAAATGACCCATCCTCAGACGAGGGAGGGGAGACACAATCCACACAAGACCTTTCCAAGAGTGTGGAATCTCAAACCCCACAATTTTTTCCCTTCAAAGATTCCAACTTTCAGTTTCAGACACTTGTAAACCAGAAGAAATCATGCCAAGAAGAGAGGGGGAAAACGTGGTTATCTAGAACAATAACAGAGACACGAATTCACGCGCCGCAGGAGCTAGAGAGCTGCGTCACCCACGAGACGGCGGAGATGCTGTCGTCGCAGTCGCCGGGGAAATCTGAGAACTGTAGGAGAAAGAGGAAGAGAACGAGACCGATTAAGAGCAAGGAAGACTTGGAGAATCAACGCATGATCCACATTGCCGTCGAACGCAACCGCCGCCTTCAAATGAACGACCACCTTAGTGTTCTCAAATCACTCATGCCCCCTTCGTATATTCAGAAGGGGGACCAAGCGTCCATTATTGGAGGTGCAATAGATTTTGTGAAGGAATTAGAGCAGCTTCTTCAATCCCTGGAGGCACAGAGAAGAATGAGAAGGAACGATGAGATTGGATTCAGCTATGGAACGACGTCGTCGTGTGGGAAAGAATCAAACTTTGGGGAAGAAGTGAAGGCAGAGAACAAGTCAGAATTTGCAGAAATAGAAGTAACTGTGATTCAAAACCATGTGAACCTGAAAGTTCAGTGCAAGAGAAGAGCACGGCAGTTAGTGAAGGCCATAGTGGGAATTGAGGATCTTAAGCTAACAATTCTGCACCTAAACGTAACTTCTTCACAGGACTCGGTTCTCTATTGTTTCAATCTCAAGATAGAAGAAGAGTGTAAAGCAGTGACAGCAAGTGAAATTGCAGGAGCAGTTGAAGATATGTTTAGGTTCATTAATGGAAGCAGCTAG 942 0.4533 MCVICPTDLWILRKLRNDPSSDEGGETQSTQDLSKSVESQTPQFFPFKDSNFQFQTLVNQKKSCQEERGKTWLSRTITETRIHAPQELESCVTHETAEMLSSQSPGKSENCRRKRKRTRPIKSKEDLENQRMIHIAVERNRRLQMNDHLSVLKSLMPPSYIQKGDQASIIGGAIDFVKELEQLLQSLEAQRRMRRNDEIGFSYGTTSSCGKESNFGEEVKAENKSEFAEIEVTVIQNHVNLKVQCKRRARQLVKAIVGIEDLKLTILHLNVTSSQDSVLYCFNLKIEEECKAVTASEIAGAVEDMFRFINGSS 313
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele42g1074 313 Coils Coil 177 197 - -
Lele42g1074 313 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 129 196 IPR036638 GO:0046983
Lele42g1074 313 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 129 180 IPR011598 GO:0046983
Lele42g1074 313 Pfam Helix-loop-helix DNA-binding domain 130 181 IPR011598 GO:0046983
Lele42g1074 313 SMART finulus 135 186 IPR011598 GO:0046983
Lele42g1074 313 MobiDBLite consensus disorder prediction 16 39 - -
Lele42g1074 313 MobiDBLite consensus disorder prediction 97 124 - -
Lele42g1074 313 PANTHER MAX DIMERIZATION, MAD 76 309 - -
Lele42g1074 313 Gene3D - 127 199 IPR036638 GO:0046983
Lele42g1074 313 MobiDBLite consensus disorder prediction 22 39 - -
Lele42g1074 313 CDD bHLH_AtFAMA_like 132 205 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele42g1074 Lele-ChrLele42 23212480 23215267 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele42g1074 122 311 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G01460 56.219 9.48e-68 213
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Lele42g1074 HLH 9.4e-09 No_clan