Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele42g1062 ATGCCAACCCCAACCCCATCAAAATCATCAACAGGAAGACCCTATGCCTCTCCTTCATCTACCATAATTATGGTAATGAGGTTCATGGCCTTTCTCATTGTACCGTTAGTTCTTCTGTCTTGCCTCGTTGTCGCTGTCTCCTCTTCTTGTACCCAATTGGATCAAGAGTCTCTCTTGGACTTCTACAACAATATATACACACAACCTCACCCTCCGCTTAATTGGTCTTCTTCTGTTGATTGCTGCTCTTGGGAAGGTATTCTTTGCGATCAGAGGAATATGGGTAATGGGGATCAGCGAGTTGTTGGCTTGTTGCTTCCTTCCAGGGGTCTCGCTGGCCCAATATCCACTGCTCTCACGAAACTCACTGGTCTGTCTCAGCTGAATCTCTCCCACAATCGACTTTCTGGTAATCTCCCAACCCAATTCTTCTCACTCCTTAGTCACCTGCACATTCTTGATTTAAGCTACAATCGTCTCTCTGATGAATTGCCAGCATCTGTTGTTAATAATAACAAAACCAGTAGTATTATCCAGGAGCTTAATTTGTCTAGCAATCTATTTCAAGGAACACTCCCTTCTTCTTTCCTTCAGTACCTTGAAGCTGCTGCAGCAGCAGGGACTTTGACATCTTTTAATGTTAGTAACAATAGCTTCATAGGTCCAATTCCCACTTCTCAGCTTTGCATTAATGAGACTGACTCCGCTCTCAGATTCTTGGATCTTTCCTACAATAAATTCAACGGTTCAATTCAATCCGGATTAGGAGCATGTTCCAAGCTGGAGATTTTCCGAGCAGGTTTCAATTCTCTCTCTGGGCCTCTTCCTGGTGATCTTTTCCATGCCGTTTCCCTCAGGGAGATCTCCTTGCCCCTCAATCAACTCTCTGGAAATATTGATGATGGAATTGCTAGCCTTACCAACCTCACAGTCCTGGAGCTCTACTCCAATGATTTCAGAGGATCCATACCCCGAGATATTGGAAAGCTATCCAAGCTGGAAAAGCTACTCCTTCATATAAACAATTTGACGGGTACTTTACCCCCATCTCTGGTTAACTGTGTCAATCTTGTTGAGTTAAATTTGAGGGTCAACCTCTTGAAGGGGAAGCTTGCAGAATTTAATTTCTCCGGATTCCAGCGGCTTACTACGCTTGATCTCGGCAACAATAATTTTACGGGCAATTTACCAACAACCCTTTATGCATGCAAATCACTGGCTGCAGTAAGGCTAGCATCTAATCAGCTTGATGGACAGATCACCCCGGATATACTTGGACTTGAGTCTCTGTCTTTTCTAGCAATATCTACCAACTCCCTGAGTAATTTCACAGGAGCTATGAAGATACTCGGGGGCCTCAAGAACCTTAGTAGCCTTGTCCTCTCAAAGAATTTTTATAATGAAACCATCCCGTATGATGAGAACTTAGTAGGCCCAGATGGATTTCAAAAACTCCAGGTTCTAGCCTTGGGTGGTTGTAATTTCACAGGTCAAGTACCAGGCTGGCTTGCAAGGCTTAGGATGCTCGAGGTCATTGATCTGTCCTATAATCTCATCACTGGTTCAATTCCTCCATGGTTGGGTAAACTTCCACAGCTATTCTACATAGAATTGTCTCATAACCAACTTACAGGAGTATTTCCCACGGAAATCACAGGACTTCATGCATTAACATCACAAGAGGCGAATGATAGAATAGAAAGGTCTTACCTGGAGTTACCCGTCTTCATTGTGCCGAACAATGCTTCTCAGCAGCAGTATTATCAGCTTTCCAACCTTCCGCCAGCAATATATCTGAGAAACAATAGTCTCCGTGGCAATATTCCTATTGAGATTGGCCTAATGAAAGTCCTACATCAGCTGGATCTGGGTAACAACAACTTCTCTGGCAGTATTCCAGTTCAAATTTCTAACTTGACTAATTTAGAGAAGTTAGACCTCTCAGGAAACCGACTATCTGGTGAAATTCCTGCTTCACTCAAGAACCTGCATTTCTTGTCATTTTTTACTGTGGCAAGAAATGATCTTCAAGGAGAGGTACCCACAGGTGGCCAATTTGATACTTTCCCTCCTTCCAGCTTTGCAGGAAACCCAAAATTATGTGGTTCAGTAATTCAACTCTCTTGTCAAAGTCCACCAGATCATAGCACAACCTTGAAAAAACAGACAACCTGGAACAAAAGTAAAATAATTGGAATTGTCGTTGCAGTTAGCTTAGCTGCCGTCTGTATCATCATTTTTTTCACAATCTGGATACTTTTCAAGAGGAGTATCAACCCAAGAGGAGATCATGATGAGATCGAAGAATCAACTTTTGCAGACTACAACAGTGGTTTTCATCCTCAAGTAGATAAGCAGGCTAGCCCAGTGGTATGGTTCCCCAATAAAACAAGTGAAATCAAAGATCTTACTATATCTGAGATCTTGAAAGCCACTGAAAATTTCAGTCTAGCAAACATTATAGGATCTGAGGATTGTGGTTTAGTTTATAGAGCGACCTTACCAGATGGAAATAAACTAGCCATTAAGAAACTTACAGGAGAATCAGGGCTTACAAAAAGGGAATTTAAAGCAGAGGTAGAGGCTTTGTTAACAGCCCAACACAAGAATCTGGTTGCGTTGCAAGGTTATTGTGTGCATGATAGCTTTCGGCTTCTCATATATACTTACATTGAAAATGGAAGTCTAGATTATTGGTTGCATGAGGACACTGCATTTCAACTTGATTGGCCAACTCGACTGAAGATAGCGCAGGGTGTGAGTTGTGGGTTGGCTTACATGCATCTCACATGCGTACCACACATTGTACATCGCAATATAAAGTCAAGCAACATCCTCCTTAATGAAAATTTTGATGCACTCATTGCTGATTTTGGGTTATCCCGATTGATTCTCCCTAATCACACTCATGTTACAACTGAACTTGTAGGTACTTTAGGCTATATTCCCCCTGAGTATGGACAAGCATCTGAGGCCACTCTTCGGGGAGATGTGTACAGCTTTGGCGTTCTCATGCTTGAGTTGCTCACTGGGAGGAGGCCTCTTAACATGTGCAAGACAAAAATGCCAATGGACCTGGTTCTTTGGTTGCAACAAATGAGGAGTGAAGGAAAACAACATCAAGTCTTCGACCCACTTCTTAGAGGAAAGAGTTTTGAAGAGGAGATGATGCAGGTACTTGATGTGGCCTGCATGTGTGTCAGCCACAATCCTTTCAAGAGACCAAGCATCAGAGAAGTCTTTGATTGGCTGAAGAATGTAGGATCAGCCAAACAACACCAGAACGAAGACTAG 3294 0.4268 MPTPTPSKSSTGRPYASPSSTIIMVMRFMAFLIVPLVLLSCLVVAVSSSCTQLDQESLLDFYNNIYTQPHPPLNWSSSVDCCSWEGILCDQRNMGNGDQRVVGLLLPSRGLAGPISTALTKLTGLSQLNLSHNRLSGNLPTQFFSLLSHLHILDLSYNRLSDELPASVVNNNKTSSIIQELNLSSNLFQGTLPSSFLQYLEAAAAAGTLTSFNVSNNSFIGPIPTSQLCINETDSALRFLDLSYNKFNGSIQSGLGACSKLEIFRAGFNSLSGPLPGDLFHAVSLREISLPLNQLSGNIDDGIASLTNLTVLELYSNDFRGSIPRDIGKLSKLEKLLLHINNLTGTLPPSLVNCVNLVELNLRVNLLKGKLAEFNFSGFQRLTTLDLGNNNFTGNLPTTLYACKSLAAVRLASNQLDGQITPDILGLESLSFLAISTNSLSNFTGAMKILGGLKNLSSLVLSKNFYNETIPYDENLVGPDGFQKLQVLALGGCNFTGQVPGWLARLRMLEVIDLSYNLITGSIPPWLGKLPQLFYIELSHNQLTGVFPTEITGLHALTSQEANDRIERSYLELPVFIVPNNASQQQYYQLSNLPPAIYLRNNSLRGNIPIEIGLMKVLHQLDLGNNNFSGSIPVQISNLTNLEKLDLSGNRLSGEIPASLKNLHFLSFFTVARNDLQGEVPTGGQFDTFPPSSFAGNPKLCGSVIQLSCQSPPDHSTTLKKQTTWNKSKIIGIVVAVSLAAVCIIIFFTIWILFKRSINPRGDHDEIEESTFADYNSGFHPQVDKQASPVVWFPNKTSEIKDLTISEILKATENFSLANIIGSEDCGLVYRATLPDGNKLAIKKLTGESGLTKREFKAEVEALLTAQHKNLVALQGYCVHDSFRLLIYTYIENGSLDYWLHEDTAFQLDWPTRLKIAQGVSCGLAYMHLTCVPHIVHRNIKSSNILLNENFDALIADFGLSRLILPNHTHVTTELVGTLGYIPPEYGQASEATLRGDVYSFGVLMLELLTGRRPLNMCKTKMPMDLVLWLQQMRSEGKQHQVFDPLLRGKSFEEEMMQVLDVACMCVSHNPFKRPSIREVFDWLKNVGSAKQHQNED 1097
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele42g1062 1097 Gene3D Ribonuclease Inhibitor 51 345 IPR032675 -
Lele42g1062 1097 Pfam Protein kinase domain 818 1081 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele42g1062 1097 Gene3D Ribonuclease Inhibitor 346 444 IPR032675 -
Lele42g1062 1097 Pfam Leucine rich repeat N-terminal domain 54 90 IPR013210 -
Lele42g1062 1097 SMART LRR_typ_2 506 530 IPR003591 -
Lele42g1062 1097 SMART LRR_typ_2 306 329 IPR003591 -
Lele42g1062 1097 SMART LRR_typ_2 330 354 IPR003591 -
Lele42g1062 1097 SMART LRR_typ_2 639 662 IPR003591 -
Lele42g1062 1097 SMART LRR_typ_2 379 403 IPR003591 -
Lele42g1062 1097 SMART LRR_typ_2 147 171 IPR003591 -
Lele42g1062 1097 SMART LRR_typ_2 122 146 IPR003591 -
Lele42g1062 1097 FunFam Tyrosine-sulfated glycopeptide receptor 1 376 714 - -
Lele42g1062 1097 PANTHER LEUCINE-RICH REPEAT RECEPTOR PROTEIN KINASE EMS1 341 471 - -
Lele42g1062 1097 Pfam Leucine Rich Repeat 641 663 IPR001611 GO:0005515
Lele42g1062 1097 SUPERFAMILY L domain-like 238 697 - -
Lele42g1062 1097 CDD STKc_IRAK 821 1086 - -
Lele42g1062 1097 SMART LRR_sd22_2 639 665 - -
Lele42g1062 1097 SMART LRR_sd22_2 530 556 - -
Lele42g1062 1097 SMART LRR_sd22_2 122 141 - -
Lele42g1062 1097 SMART LRR_sd22_2 306 335 - -
Lele42g1062 1097 SMART LRR_sd22_2 147 183 - -
Lele42g1062 1097 ProSiteProfiles Protein kinase domain profile. 815 1084 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele42g1062 1097 Gene3D Transferase(Phosphotransferase) domain 1 891 1097 - -
Lele42g1062 1097 Gene3D Phosphorylase Kinase; domain 1 780 890 - -
Lele42g1062 1097 SUPERFAMILY Protein kinase-like (PK-like) 790 1084 IPR011009 -
Lele42g1062 1097 ProSiteProfiles Leucine-rich repeat profile. 641 664 IPR001611 GO:0005515
Lele42g1062 1097 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 276 371 - -
Lele42g1062 1097 Pfam Leucine Rich repeat 148 163 IPR001611 GO:0005515
Lele42g1062 1097 FunFam Leucine-rich repeat receptor-like protein kinase 891 1095 - -
Lele42g1062 1097 Pfam Leucine rich repeat 484 543 IPR001611 GO:0005515
Lele42g1062 1097 SUPERFAMILY L domain-like 49 289 - -
Lele42g1062 1097 PRINTS Leucine-rich repeat signature 639 652 - -
Lele42g1062 1097 PRINTS Leucine-rich repeat signature 125 138 - -
Lele42g1062 1097 Gene3D Ribonuclease Inhibitor 445 716 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele42g1062 Lele-ChrLele42 23089611 23092904 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele42g1062 9 756 Miscellaneous Gene Families AT1G17250 48.939 0.0 666
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-Xb-1 Lele42g1062 Pkinase 8.5e-38 CL0016