Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele42g1059 ATGATTGAGGATCGGGGAGTTTTGCCGGTGGTGTTCATTAGCACCTGCATTCTGTGTTGGACGCTAATTGCTGTCAATGGAGACACAGATCAAACTGATGCCGCGGCTTTACAGGCTATGTTTAATGGTATGAACTCACCATCCCAATTAGGTTGGTCAGCAAATGGTGATGATCCCTGTGGACAGTCTTGGAAAGGCATTACTTGCTCAGGCAACAGAGTTACAGAGATTAAGTTGCCTAATCTTGGATTATCTGGATCATTCGGTTACCAGCTACAAACCATGACATCTGTGACCAACCTAGATATGAGTCACAATAGTTTTGGAGGTGACATGCCATACCAACTTCCACCAAATTTGCAGAGATTAGATCTTTCCAGTAACCAATTCACTGGGAGTTTACCGTACTCAATTACTGATATGACTTCTCTTACATACCTAAATGTTGCTCACAATCAACTACAGAATGGACTGAGTGACGTGTTTCAAAAGCTTTCTAAGCTAGCCACACTGGATCTCTCTTTCAATTCTATGTCAGGCAGCCTCCCTCAGGGTTTCAGCTCACTTTCAAGCATCGGCAGCATCTATCTGCAAAACAACCAGTTTTCAGGGACTATTGATGTCCTCGCCAATCTGCCTCTTGATAATCTGAATGTGCAAAACAACCGTTTTACAGGCTGGATACCAGAACAGCTGAAAGGCATTAACCTCCAGACATCAGGAAATACATGGAACTCGGGTCCTGCCCCGCCTCCACCTCCTGGGACACCCCCTGCAACTAGAACGAACCGGCATCACAAATCTGATGGAAGTAATAGCTCTTCAGATGATGGCACCAGTAATGGGGGTAAAAAGTCTGGTATAGGAGCTGGTGGTATTGCTGGAATAGTGATCTCCATCCTTGTTGTTGGGGCAGTAGTTGCTTTCTTTTTGTTGAAAAGAAAATCCAGGAAGTCATCTTCAGATATAGAAAGGCATGACAATGAGCCTTTTGCTCCACTTAATTCAAACGAAGTGCATGAAGTGAAGTCCGTGCAAGCTCCCCCGGTAGTTGACATGAAGACATTTGATACTTCTGCCTCAATAAATATTAAACCCCCACCTATTGAACGTCACAGATCATTTGATGAAGATGAATTTTCCAAGAAACCAATTATTGTCAAGAAAACTATAAAAGCTCCTGCAAATGTGAAAGCATATTCTATAGCAGACCTGCAGATCGCTACCGGGAGCTTCAGTATGGACAACCTCCTTGGGGAGGGATCTTTTGGACGTGTTTATCGTGCTCACTCTGATGATGGAAAGGTTCTTGCTGTGAAGAAAGTTGATTCATCTATCCTTCCCCATGATTCAGATGATTTTATGGAAATAGTTTCTAACATCTCCAACTTGCACCATCCAAATGTAACAGAGCTTGTTGGTTATTGTTCAGAGCATGGACAACACCTCCTAGTCTATGAGTTTCATAAAAGTGGATCACTACGTGACTTCCTTCACTTATCAGATGAATATAACAAACCATTAATATGGAATTCCCGCGTCAAGATTGCTTTGGGGACCGCACGTGCTTTAGAGTACCTGCATGAAGTTTGTTCACCATCAGTTGTTCATAAGAATATTAAGTCAGCTAACATATTGCTTGATGCGGAGCTCAATCCTCATCTCTCGGACTCAGGATTGGCAAGCTATATTCCAAATGCTGACCAGGTCTTGAACCGTAATGCTGGATCTGGGTACGATGCACCTGAAGTCGCCTTGTCTGGTCAATATACTTTAAAGAGTGATGTTTATAGCTTTGGAGTTGTTATGTTGGAGCTTCTTAGTGGACGGAAACCATTCGATAGCTCAAGACCAAGATCTGAGCAATCTTTGGTACGATGGGCAACACCTCAACTCCATGATATTGATGCATTGGCTAAAATGGTTGATCCTGCTCTGGAAGGGCTATACCCTGTTAAGTCCCTTTCTAGGTTTGCTGATGTCATTGCTCTGTGTGTTCAGACGGGGCCTGAATTCCGACCACCTATGTCTGAGGTGGTTCAAGCGTTGGTTCGCTTAGTGCAGCGAGCGAACATGAGCAAGAGGACATTTGGAACGGATCAAGGAGGATCCAATCGAGGAGGCGATGATCAAGACACACAAGATATGTAA 2151 0.4375 MIEDRGVLPVVFISTCILCWTLIAVNGDTDQTDAAALQAMFNGMNSPSQLGWSANGDDPCGQSWKGITCSGNRVTEIKLPNLGLSGSFGYQLQTMTSVTNLDMSHNSFGGDMPYQLPPNLQRLDLSSNQFTGSLPYSITDMTSLTYLNVAHNQLQNGLSDVFQKLSKLATLDLSFNSMSGSLPQGFSSLSSIGSIYLQNNQFSGTIDVLANLPLDNLNVQNNRFTGWIPEQLKGINLQTSGNTWNSGPAPPPPPGTPPATRTNRHHKSDGSNSSSDDGTSNGGKKSGIGAGGIAGIVISILVVGAVVAFFLLKRKSRKSSSDIERHDNEPFAPLNSNEVHEVKSVQAPPVVDMKTFDTSASINIKPPPIERHRSFDEDEFSKKPIIVKKTIKAPANVKAYSIADLQIATGSFSMDNLLGEGSFGRVYRAHSDDGKVLAVKKVDSSILPHDSDDFMEIVSNISNLHHPNVTELVGYCSEHGQHLLVYEFHKSGSLRDFLHLSDEYNKPLIWNSRVKIALGTARALEYLHEVCSPSVVHKNIKSANILLDAELNPHLSDSGLASYIPNADQVLNRNAGSGYDAPEVALSGQYTLKSDVYSFGVVMLELLSGRKPFDSSRPRSEQSLVRWATPQLHDIDALAKMVDPALEGLYPVKSLSRFADVIALCVQTGPEFRPPMSEVVQALVRLVQRANMSKRTFGTDQGGSNRGGDDQDTQDM 716
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele42g1059 716 FunFam protein STRUBBELIG-RECEPTOR FAMILY 8 489 697 - -
Lele42g1059 716 ProSiteProfiles Protein kinase domain profile. 412 686 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele42g1059 716 SUPERFAMILY L domain-like 30 233 - -
Lele42g1059 716 FunFam Protein STRUBBELIG-RECEPTOR FAMILY 8 376 488 - -
Lele42g1059 716 MobiDBLite consensus disorder prediction 694 709 - -
Lele42g1059 716 MobiDBLite consensus disorder prediction 238 283 - -
Lele42g1059 716 ProSitePatterns Protein kinases ATP-binding region signature. 418 441 IPR017441 GO:0005524
Lele42g1059 716 Pfam Protein tyrosine and serine/threonine kinase 414 683 IPR001245 GO:0004672|GO:0006468
Lele42g1059 716 SUPERFAMILY Protein kinase-like (PK-like) 396 683 IPR011009 -
Lele42g1059 716 MobiDBLite consensus disorder prediction 694 716 - -
Lele42g1059 716 FunFam protein STRUBBELIG-RECEPTOR FAMILY 3 30 255 - -
Lele42g1059 716 Gene3D Ribonuclease Inhibitor 30 252 IPR032675 -
Lele42g1059 716 CDD STKc_IRAK 418 686 - -
Lele42g1059 716 Pfam Leucine rich repeat N-terminal domain 31 70 IPR013210 -
Lele42g1059 716 Gene3D Phosphorylase Kinase; domain 1 376 488 - -
Lele42g1059 716 Gene3D Transferase(Phosphotransferase) domain 1 490 704 - -
Lele42g1059 716 Pfam Leucine rich repeat 98 154 IPR001611 GO:0005515
Lele42g1059 716 PANTHER LEUCINE RICH REPEAT KINASE 2 72 690 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele42g1059 Lele-ChrLele42 23038990 23044361 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele42g1059 10 715 Strubbelig Receptor Gene Family AT1G53730 66.480 0.0 877
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-V Lele42g1059 PK_Tyr_Ser-Thr 3.1e-42 CL0016