Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele42g1052 ATGAACATGAAGCAGACCTGCTTCTCTCTACTGGCTTTTTTTCTCACCCTTACACTGTTGTTATTATCAGCTAGGGACAACTCAGAAGTTCGTTCTTTGCCCTTAAGCAAGATTTCATCTTCTTCTGTGCAGGCACATAATAGGAATCCTATGAAGAAGTTGGGGTCATCTTTCAGAAGAATACCTCCAAGCACTTCAAATCCTACACAGAACCACTTCTTGCTCTCTGGCAAAAAACTCAAACCACTCATGACCAACCTAAAACAAGTTTTCGCCGGAATATCCCATTATTCAGGCACCAGCAATCCCATGTCCAAGAAGAACAGCTACTTAGCATCCTTCACTTTTCTGCTTCTCGTCTCTGTTACTACTGTCGCCGTTGTCGTCCGAGTTCGCTCTCAGAAGAACTCTAACACCGACATCGACAACCTTGTTCCTTTCACTCGATCACACACCACTGTGAAAGTCGCTTGTAGTTATACTTTGTACCCGGAACTTTGCTTCTCCACCATCGTCGCCGAACCTGGTTTCACCGATAAAGTCTCTACAGACAAAGACGTCATAGAACTATCCCTTAACATAACCATCAGATCCGTACAGAATAACTGCGTCACCATCAAGAATCTCCAAACCAGAACAGACCTCACAGAGAGAGCGAAAATGGCTCTTTTTGATTGCTTACAAATCATTGACAACACTCTTTCCGTGCTTCGCCTAGCCGTCTCATATCTCAACGACTCAAGTCATCACGCCGACGACCTCAAGACTCTCGTCAGCGCCGCCATAACCGACCAAGAGACTTGCCTGGACGGTTTCTCCCATGATGACAAAGACAGGAACATGAGGGACGGAGAACTGATGGACGGACACATGAACGTTGACCAAATGTCCAGCAACGCTCTGGCGATGATTGTGAAAATGATTGATTCTGAAGTGTCAAGTAGAAAAAGAAAGATAATGGAAGTGGAGGAAGATGGGGATGGGATTGGGTGGCCGGAGTGGATGTCGGCGGCAGACCGCAGGCTTCTGCAAGCGTCAACAACAGTGACCCCAGATGTGGTGGTGGCGGCAGACCGGAGCGGGAACTACACGACGGTGTCGGAGGCCGTGGCGGCAGCGCCAGAGCAGAGTAGCACGAGGTATGTGATACATATAAAAGCGGGAGAGTACAGTGAGCTAGTGGAGGTGCCAATTGAGAAGACGAATATCATGTTTGTGGGAGATGGAGCATCGACCACCATCATCACAGGGAGCCGAAACGTTGTTGATGGAAGCACAACCTATAGATCTGCCACAGTAGCGATAGAGGGAGATGGATTCTTGGCACGAGACATAAGTTTCGAGAACACGGCGGGTCCGGAGAAGCACCAAGCGGTGGCTCTGAGAGTGGAAGGTGATCTGTCAGCATTCTACAGTTGCAATTTCCTTGGGTATCAGGACACCCTTTACGTGCGGATCAATCGACAGTTCTTCGTGAAGTGCCTCATCCAAGGCACCGTCGACGTCATCTTCGGAAACTCAGCCGTCGTGTTCCAGTACTGCGAACTCCGATCACGGCTTCCCTCCTCAGGACAGAACAACGTACTCACTGCACAAGGACGAGAAGACCCCAACCAGAACACCGGCATTGTCATCCAAAATTGCAGCATCGATGCCACCGAGGATCTGGAGGCAGCGAATTCGAATGGAAGCGTGAAGTCGTACCTGGGGAGGCCATGGATGGAGTATTCAAGGACAGTGATAATGGAGAGTTACATAAGCGAAATAATAAACCCAGCTGGGTGGTTAGCTTGGAATGGGACATTTGCATTGGACACTTTGTTCTATGGCGAGTATAAGAACATTGGACCTGGGGCTAATACTTCCGAAAGAGTTGATTGGGAAGGCTTTAGGGTTATTACCAATGCTTCTGAAGCTCAAAGTTACACTCCTGCAAGCTTCATTTCTGGCTCCACTTGGTTGAACTCTACTGGCTTTCCATATGTTCTTGGACTTTGA 1998 0.4845 MNMKQTCFSLLAFFLTLTLLLLSARDNSEVRSLPLSKISSSSVQAHNRNPMKKLGSSFRRIPPSTSNPTQNHFLLSGKKLKPLMTNLKQVFAGISHYSGTSNPMSKKNSYLASFTFLLLVSVTTVAVVVRVRSQKNSNTDIDNLVPFTRSHTTVKVACSYTLYPELCFSTIVAEPGFTDKVSTDKDVIELSLNITIRSVQNNCVTIKNLQTRTDLTERAKMALFDCLQIIDNTLSVLRLAVSYLNDSSHHADDLKTLVSAAITDQETCLDGFSHDDKDRNMRDGELMDGHMNVDQMSSNALAMIVKMIDSEVSSRKRKIMEVEEDGDGIGWPEWMSAADRRLLQASTTVTPDVVVAADRSGNYTTVSEAVAAAPEQSSTRYVIHIKAGEYSELVEVPIEKTNIMFVGDGASTTIITGSRNVVDGSTTYRSATVAIEGDGFLARDISFENTAGPEKHQAVALRVEGDLSAFYSCNFLGYQDTLYVRINRQFFVKCLIQGTVDVIFGNSAVVFQYCELRSRLPSSGQNNVLTAQGREDPNQNTGIVIQNCSIDATEDLEAANSNGSVKSYLGRPWMEYSRTVIMESYISEIINPAGWLAWNGTFALDTLFYGEYKNIGPGANTSERVDWEGFRVITNASEAQSYTPASFISGSTWLNSTGFPYVLGL 665
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele42g1052 665 Gene3D - 345 665 IPR012334 -
Lele42g1052 665 Pfam Plant invertase/pectin methylesterase inhibitor 153 303 IPR006501 GO:0004857
Lele42g1052 665 Gene3D Invertase/pectin methylesterase inhibitor family protein 149 308 IPR035513 -
Lele42g1052 665 FunFam Pectinesterase 346 665 - -
Lele42g1052 665 SMART PMEI_2 149 303 IPR006501 GO:0004857
Lele42g1052 665 Pfam Pectinesterase 352 650 IPR000070 GO:0030599|GO:0042545
Lele42g1052 665 SUPERFAMILY Pectin lyase-like 346 664 IPR011050 -
Lele42g1052 665 FunFam Pectinesterase 150 308 - -
Lele42g1052 665 TIGRFAM PME_inhib: pectinesterase inhibitor domain 149 305 IPR006501 GO:0004857
Lele42g1052 665 CDD PMEI-like_3 157 304 - -
Lele42g1052 665 PANTHER PECTINESTERASE 123 655 - -
Lele42g1052 665 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 154 307 IPR035513 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele42g1052 Lele-ChrLele42 22999474 23004953 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele42g1052 150 665 Carbohydrate Esterase AT3G14310 57.353 0.0 601