Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele42g1046 ATGTGGTATAGATCAGCATCTTTTATTCTCGACAACAGGCAGCAAAACGACGCCGCTTTAGCACCTGACACAATTTCAATCACTCCTCCTGGTAGTACTGCCCGGACTTCCATGGCCGATACCGTTCAGAACCCCAACCCTAACCCTAAGATTTCCGCTTACTATCAGACTAGGGCGGCCCACCATGGCGTTGTTACCAGCGACTGGCTCGCCCAGGCTCAGGCTGCTATCGAGCAGAATCCTGATGGCAATGTGATTTCGGGAAGTGATCTAAGGGCATCGGATTCTGATAAGCCGTTCAGCGTGATCGATGAGTTCAATAACTGGCGGAAACAGCCCGATTTGGCCGAAGCCGTGGCGGCTATTCGCGCCTTGGCTGCTGTGATCAGGTCAAGTAAGGCTACTACGATGATGGAGCTGGAAATTGAGCTCAAGAAGGCTTCGGATTCTCTCAAATCCTGGGATACAACCTCTATCTCTTTGACAGCTGGCTGTGATCTGTTTATGCGATATGTAACTAGGACTGCTGCCTTAGAATATGAAGACTTTAATTCTGCAAAGGCACGATTAATTGAACGTGCTGAAAAGTTTGGGGAAATCTCGTACAAGGCTCGTAAAGTTATTGCAATGCTGGCTCAAGATTTTATATTTGATGGCTGTACAATTTTAGTTCATGGTTATTCTAGAGTTGTCCTTGAAGTTATCAGATTGTCAGCACAAAATAAGAAAATGTTTCAGGTTTTCTGTACAGAAGGAAGGCCAGACCGGACGGGTTTGCGGTTGTCTAATGAACTAGCAAAACTTAATATCCCCGTGAAACTCCTGATAGACTCTGCAGTGGCATATACCATGGACGAAGTGGACTTGATATTTGTGGGGGCAGATGGCGTGGTTGAGAGTGGGGGTATAATTAACATGATGGGAACCTACCAAATCGCATTGGTTGCCCACAGCATGAACAAACCAGTTTACGTGGCAGCTGAAAGCTACAAGTTCGCTCGTCTCTATCCTTTGGACCAAAAGGATTTGGCGCCTGCGTTACTTCCCATTGATTTTGGAGTGCCTATTCCATCAAAGGTTGAGGTTGAAAGGTCTGCGAGGGATTATACTCCTCCACAATACTTGACTCTGCTTTTCACTGATTTAGGTGTTCTTACTCCTTCCGTTGTTAGTGATGAGCTTATTCAACTATACTTGTAG 1200 0.46 MWYRSASFILDNRQQNDAALAPDTISITPPGSTARTSMADTVQNPNPNPKISAYYQTRAAHHGVVTSDWLAQAQAAIEQNPDGNVISGSDLRASDSDKPFSVIDEFNNWRKQPDLAEAVAAIRALAAVIRSSKATTMMELEIELKKASDSLKSWDTTSISLTAGCDLFMRYVTRTAALEYEDFNSAKARLIERAEKFGEISYKARKVIAMLAQDFIFDGCTILVHGYSRVVLEVIRLSAQNKKMFQVFCTEGRPDRTGLRLSNELAKLNIPVKLLIDSAVAYTMDEVDLIFVGADGVVESGGIINMMGTYQIALVAHSMNKPVYVAAESYKFARLYPLDQKDLAPALLPIDFGVPIPSKVEVERSARDYTPPQYLTLLFTDLGVLTPSVVSDELIQLYL 399
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele42g1046 399 FunFam Translation initiation factor eIF-2B subunit alpha 203 399 - -
Lele42g1046 399 Coils Coil 137 157 - -
Lele42g1046 399 Gene3D - 202 399 IPR042529 -
Lele42g1046 399 Pfam Initiation factor 2 subunit family 113 387 IPR000649 GO:0044237
Lele42g1046 399 SUPERFAMILY NagB/RpiA/CoA transferase-like 101 398 IPR037171 -
Lele42g1046 399 FunFam Translation initiation factor eIF-2B subunit alpha 98 200 - -
Lele42g1046 399 PANTHER TRANSLATION INITIATION FACTOR EIF-2B SUBUNIT ALPHA 61 399 - -
Lele42g1046 399 Gene3D - 98 200 IPR042528 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele42g1046 Lele-ChrLele42 22950805 22954454 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele42g1046 1 399 Eukaryotic Initiation Factors Gene Family AT1G53880 78.500 0.0 615