Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele42g1034 ATGGCCTCAGCAACAGCAGCCGCCGCGTCGCCTCGCCAGTTGTCGCAGAAGGAGGCTGACATCCAAATGATGTTGGCCGCGGAGGTCCATCTGGGAACCAAAAATTGTGATTTCCAGATGGAGCGTTATGTCTTCAAGCGCCGCAACGATGGGTCATTGTTGCCATCAAAAAACCCTCAGGATATTATTGTTCAGTCGGCAAGACCTTATGGTCAGAGAGCAGTTCTTAAGTTTGCTCAGTACACTGGTGCCCATGCAATTGCAGGAAGGCACACTCCAGGAACATTCACTAATCTTGGTGAGCCTCGTCTTCTCATTCTCACTGATCCAAGAACAGCTCATCAGAATGCATTTGCTTATGGTGTTGTTGACTTGCATGTGCAGCCTATTGAGGAAGCTGCTCTTGGAAATATAACAACAAGGATGGTTTTGCAGATGTGCGGCACCATTCGCCCGGGGCATAAGTGGGATGTCATGGTGGATTTATTCTTCTATAGAGAACCAGAAGAGGCTAAGCAACAAGAGGAGGATGAAGCATCTCCTGTCCAAGATTATGCCATCGCGGACTTCAATGCTGCTGCTATCGGTGGCTTTCCTGCTGTCAACTGGACCCCAGAAGCTGTTGCTGGAGATTTGGGAGAACCTGCCCCTGCGGTTGAATCTGTTCCTGCTGCTGGCTGGGAATAA 687 0.4978 MASATAAAASPRQLSQKEADIQMMLAAEVHLGTKNCDFQMERYVFKRRNDGSLLPSKNPQDIIVQSARPYGQRAVLKFAQYTGAHAIAGRHTPGTFTNLGEPRLLILTDPRTAHQNAFAYGVVDLHVQPIEEAALGNITTRMVLQMCGTIRPGHKWDVMVDLFFYREPEEAKQQEEDEASPVQDYAIADFNAAAIGGFPAVNWTPEAVAGDLGEPAPAVESVPAAGWE 228
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele42g1034 228 SUPERFAMILY Ribosomal protein S2 16 116 IPR023591 -
Lele42g1034 228 Gene3D - 20 180 - -
Lele42g1034 228 PANTHER 40S RIBOSOMAL PROTEIN SA 140 212 IPR005707 GO:0003735|GO:0006412|GO:0015935
Lele42g1034 228 CDD RPS2 24 140 IPR001865 GO:0003735|GO:0005840|GO:0006412
Lele42g1034 228 ProSitePatterns Ribosomal protein S2 signature 1. 21 32 IPR018130 GO:0003735|GO:0005840|GO:0006412
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele42g1034 Lele-ChrLele42 22865664 22867436 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele42g1034 3 228 Cytoplasmic Ribosomal Protein Gene Family AT3G04770 48.288 1.78e-79 238