Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele42g1031 ATGGCGAATGGAGAAGATAAAGGCAATGACTTCTACGCGGTTATGGGATTGGATAAGGAGTGCACAGAATCAGAGCTCAGAAATGCTTATAAGAAACTCGCAATGAAATGGCACCCAGATCGTTGTTCTGCGTCTGGGAATTCAAAGTTCGTGGAAGAAGCTAATAAGAAATTCCAAGCAATTCAACAAGCATATTCTGTTTTAGCTGATGCGAATAAGAGGTTCTTGTATGACATAGGAGTCTATGACAGCGATGACGACGACAATGGGATGGGAGAGTTCTTGAACGAAATGGTAACAATGATGAGCCAAACAAAACCAAATGAAAATGGGGAAGAGAGCTTTGAGGAGTTGCAACAGCTGTTTGAAGATATGTTTCAAGGTGACATTGGATGTTCTGGAAATGACTCCCACACTGCTGCTTCTTGTTCAACGTCATCTACATACGTAACCTTCTCTGAAAGTTCCACTTCTAACAAACGCAATTCCTCGGAGATGAATGTCGGCCACAATGTGGATTCTAATGGCTTTGAAGCCACCACCTTCCAAAACTTCTGTTTAGGGGTGGATCGGCTGCAAGACATAAAGAAGGGAGGAGGAGGAGGAGTACGAGGAACAGGTAGCAGTAAGAGAAGACAGGGCAGGAAGCAAAAGGTAGCATCTGGACATGATGTTTCATCCAATGATTTCTCCTGCATTTCTGCATAG 708 0.435 MANGEDKGNDFYAVMGLDKECTESELRNAYKKLAMKWHPDRCSASGNSKFVEEANKKFQAIQQAYSVLADANKRFLYDIGVYDSDDDDNGMGEFLNEMVTMMSQTKPNENGEESFEELQQLFEDMFQGDIGCSGNDSHTAASCSTSSTYVTFSESSTSNKRNSSEMNVGHNVDSNGFEATTFQNFCLGVDRLQDIKKGGGGGVRGTGSSKRRQGRKQKVASGHDVSSNDFSCISA 235
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele42g1031 235 SMART dnaj_3 9 73 IPR001623 -
Lele42g1031 235 SUPERFAMILY Chaperone J-domain 8 80 IPR036869 -
Lele42g1031 235 ProSiteProfiles dnaJ domain profile. 10 81 IPR001623 -
Lele42g1031 235 MobiDBLite consensus disorder prediction 220 235 - -
Lele42g1031 235 CDD DnaJ 10 70 IPR001623 -
Lele42g1031 235 Pfam DnaJ domain 10 78 IPR001623 -
Lele42g1031 235 Gene3D DnaJ domain 7 137 IPR036869 -
Lele42g1031 235 PRINTS DnaJ domain signature 53 73 IPR001623 -
Lele42g1031 235 PRINTS DnaJ domain signature 30 45 IPR001623 -
Lele42g1031 235 PRINTS DnaJ domain signature 12 30 IPR001623 -
Lele42g1031 235 MobiDBLite consensus disorder prediction 197 235 - -
Lele42g1031 235 PANTHER PUTATIVE, EXPRESSED-RELATED 2 207 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele42g1031 Lele-ChrLele42 22834356 22838275 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele42g1031 12 78 C2H2 Transcription Factor Family AT1G74250 41.176 3.20e-10 57.8