Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele42g1019 ATGTCGAAATTCCCGGACCCGGAGGCATATGGCCGGAGGCTCGGCAAGGCGCCGGAGAGGTCCAATTTCACTCAGTATTGTAACGTCTTGAGCCAACTCTTGAAGGAGAAGCGAGGGTCTGGATCTTTAAGCCTTGGGATGGCTGGGAAAATGGAATCTAGAGCAATTACGAAGGATTCGAAGACAAACCTGGAAAATCCTGATGATACTTTGAGACTAAATGCTTCAGCTATGGAATGTCTTCCTCAGTTCGTGGAAAACGCCTGCATCAAGAAGTCTGATTCGAGGTCAGACTCTGAACCCCAATTGACGATTTTTTATGCTGGAAAAGTTTTGGTGTTTAATGCTTTTGCTCCTGAAAAGGCCACAGAGATCATGGAACTCGCCACCAAATTAGGCTCTGATTTTACTGTTTCTGACATTAACAAGAACCTCCCAAGTGCTTCTACTGCTAAAGAAAATCAGGATGTGGCCAAAGTTCCTCAAAACAACACTGCTCAGGAACAGGCAGTTCGAAAGTCAGGACCTTCACCTATTAAATCAGATATGAGATACCCAAGAAGAGCTTCGCTTCTAAAGTTCCTTGAGAAGAGAAAAGAAAGGGTGATTGCTAAAGGACCTTACCAGCTGAACGGTTCAAATAATCCAAAGCCGGATGAAAGCAGTTCGGGAGACCCTGATCAAGGCCAATCTTCCAAATCATTTGACCTTAACATATAG 720 0.4458 MSKFPDPEAYGRRLGKAPERSNFTQYCNVLSQLLKEKRGSGSLSLGMAGKMESRAITKDSKTNLENPDDTLRLNASAMECLPQFVENACIKKSDSRSDSEPQLTIFYAGKVLVFNAFAPEKATEIMELATKLGSDFTVSDINKNLPSASTAKENQDVAKVPQNNTAQEQAVRKSGPSPIKSDMRYPRRASLLKFLEKRKERVIAKGPYQLNGSNNPKPDESSSGDPDQGQSSKSFDLNI 239
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele42g1019 239 MobiDBLite consensus disorder prediction 203 239 - -
Lele42g1019 239 Pfam Jas motif 187 209 IPR018467 -
Lele42g1019 239 SMART tify_2 96 131 IPR010399 -
Lele42g1019 239 PANTHER PROTEIN TIFY 4A-RELATED-RELATED 16 219 IPR040390 -
Lele42g1019 239 MobiDBLite consensus disorder prediction 208 239 - -
Lele42g1019 239 MobiDBLite consensus disorder prediction 148 174 - -
Lele42g1019 239 MobiDBLite consensus disorder prediction 148 185 - -
Lele42g1019 239 Pfam tify domain 99 129 IPR010399 -
Lele42g1019 239 ProSiteProfiles Tify domain profile. 96 131 IPR010399 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele42g1019 Lele-ChrLele42 22754912 22757402 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele42g1019 12 217 Tify Gene Family AT1G19180 34.440 5.03e-25 97.4
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Tify Lele42g1019 tify 2.9e-14 No_clan