Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele42g0995 ATGATGAATACTGCTACTGCAAGAAATAGGCCTCCTTTCACAGCTTCTCAGTGGCAAGAACTTGAACAACAAGCTCTTGTGTTCAAATATATGGTCTCTGGAACACCGATCCCACCTGATCTCATTTACTCCATCAAAAGAAGCCTTGACTCATCAATATCTTCAAGGCTTTTCTCTCATCATCCTGGTGTGGGATGGGGATGTTTTGAGATGGGTTTTGGGAGAAAAATTGACCCAGAACCAGGAAGATGCAGAAGAACAGATGGAAAGAAATGGAGATGCTCAAAGGAAGCATATCCAGATTCAAAATACTGTGAAAAACACATGCACAGAGGAAGAAACCGTTCAAGAAAGCCTGTGGAAGTTCCTTCATCAACAAGCAGCATTTCAACAAACACCTCGCAATCAATCTCACCATATGGTTTTAACAGAGCTCTTTCAATGATGAGCAGCAACCCAAATCACAACAACTCATTCTCTTCTTCTTTCCCTTTCTCTGAATCATCATCTCAATATCCTTACCAAAGTTCTTCTCTTAATCCCTTCTTTTACAACACCCATTCATCAACCTGTTCGAGACCTCCTGATTCTGATTTCTCATCTCATAGCAACACTACCCATCAGTTATTTTTGGACTCTGGATCTTATTCTCAGGATGAGAAAGACTATAGAAATATTCATGTGGACGAAAGGGCATTTTTCCCAGAAGCTTCAGGGTCAGCTAGAAGCTTCCCTGACTCATACCACCAATTATCTATGAGCTCCTACAATAAATCCTATTCAAACTCTCACCAGTTCCAAGGCCTCAACGATAATGACCGTAATCCAAGGCAACAAGAAGAAGAAGAGCAACATTGTTTTGTTCTAGGCACTGACTTCAAATCACCAAGACCAAGCAAAAGTGAGAAAGAGACTAGTAGTACTGACACTACCCAGAGACCACTTCACCACTTCTTTGGGGATCAGTGGACTCAAAAGAACACAGATTCTTGGCTTGATCTTGCTTCCAACTCAAGAATCCCCACAGTGGATACAGCCAAGAGAGAGAGAGAGAGAGAGTGA 1062 0.4181 MMNTATARNRPPFTASQWQELEQQALVFKYMVSGTPIPPDLIYSIKRSLDSSISSRLFSHHPGVGWGCFEMGFGRKIDPEPGRCRRTDGKKWRCSKEAYPDSKYCEKHMHRGRNRSRKPVEVPSSTSSISTNTSQSISPYGFNRALSMMSSNPNHNNSFSSSFPFSESSSQYPYQSSSLNPFFYNTHSSTCSRPPDSDFSSHSNTTHQLFLDSGSYSQDEKDYRNIHVDERAFFPEASGSARSFPDSYHQLSMSSYNKSYSNSHQFQGLNDNDRNPRQQEEEEQHCFVLGTDFKSPRPSKSEKETSSTDTTQRPLHHFFGDQWTQKNTDSWLDLASNSRIPTVDTAKRERERE 353
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele42g0995 353 MobiDBLite consensus disorder prediction 274 288 - -
Lele42g0995 353 MobiDBLite consensus disorder prediction 259 353 - -
Lele42g0995 353 MobiDBLite consensus disorder prediction 109 136 - -
Lele42g0995 353 MobiDBLite consensus disorder prediction 311 342 - -
Lele42g0995 353 Pfam QLQ 12 45 IPR014978 GO:0005524|GO:0005634|GO:0006355
Lele42g0995 353 ProSiteProfiles QLQ domain profile. 12 47 IPR014978 GO:0005524|GO:0005634|GO:0006355
Lele42g0995 353 Pfam WRC 79 121 IPR014977 -
Lele42g0995 353 MobiDBLite consensus disorder prediction 296 310 - -
Lele42g0995 353 PANTHER GROWTH-REGULATING FACTOR 5 11 330 IPR031137 GO:0005634|GO:0006351|GO:0032502
Lele42g0995 353 MobiDBLite consensus disorder prediction 259 273 - -
Lele42g0995 353 ProSiteProfiles WRC domain profile. 78 122 IPR014977 -
Lele42g0995 353 SMART QLQ_2 11 47 IPR014978 GO:0005524|GO:0005634|GO:0006355
Lele42g0995 353 MobiDBLite consensus disorder prediction 119 136 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele42g0995 Lele-ChrLele42 22554235 22555730 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele42g0995 10 325 GRF Transcription Factor Family AT3G13960 40.548 1.25e-67 216
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRF Lele42g0995 WRC 2.4e-21 No_clan