Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele42g0990 ATGTTTTGTAGTATGGACGTGGAGCAAGTTTCAAGTTTCGTGGTGTTAGTGGAAAAAATGTTAACTTTATCTTTTTTGGTTCTTTCTCGACTTTCCAGTTTGTATACTGGAGGTGCATGTGAATTTTCCATTGAGATGTTGGCTGGAATTGAGGATAATGACGAGGGGAAGCTTGAAGACAGTGGGGTTGATAGAAGTAGCTCTGATTTTTCTTCACCGAAGCATGTTGCCAACCCAGTTGTGTACAAGCTCGTGCGGGTTGAAGGTGATGGGAGTTTAGTTCCTGCAACAGATGATGAATTAATTGAGGTGGAGGATTTCCTTGAGTACGATCAGATTGAAATGGGTGATGATGTGGACGCTGGACTCCATGAAGGATGTTCATCAATTGAAAGGTCTTCCTCCGAGAAGCTTCAGTTGGAGTGCTCAGAAGATACTGCAGAGGCAGATCCAGGGAAATTAAATGCACGACTTCAGATGTTGCAAAACGTCAAGGAGGAAGAGAAGCTTCATTTGGCCTGTGTATCACCTGGTCTTTCTTATGTAAATGAAGACAGCCAGTATTCTGCTGCTGATTTGCCTGTCATGGATGGGATAATTCAGTGTGATACTTCCTTCCAGGAAATTATTCCTTCTTCAGCACCATCTTTAAATAACAGTCATAGTAATCAATCACAAAGTATTGGTGGGTGTTCTAGACCTTCCGAAGGACAGATAGAAAGTGGATCAACTACCTCTGCTGTCTATTCTACTTTGAAGCCAGATTTTTCAATGATAAAAGGAGAAATATGCTTGGACAAGTTATCAATCAGAGAACTTCATGAACTTTTCAAAGTGACTTTTGGTCGGGAAACTACTGTGAAAGACAAGCAGTGGCTGACGAGAAGGATTGCCATGAGTTTAACTAACTCATGTGATGTTTCAGCAACAACTTTCATAGTTAGAGATAACAAATTAGTTAAAAAAAGTGAGGAAGGTAATGATGGAAATGTGGATGCTGTACTCTTCAAGGATACTAGGGCTGGAAAAGAGGATATCAACTGTAAGGATTCATCATGTGCTGAGGCTACTGGAAATGATGATAATCAAGTTGTTTCTGTAAAGAAACTGAGAAGTCATAAAGTGGAACATGATTTGTCTAGGGAGAGTCTCCAGACAGAACAAAGAGCTGCCAAAAGAATCCGTAAGCCCACTAGGAGATATATTGAAGAGCTCTCTGAAAATGAGTCCAGGGACTACAATCCTAGGTTGTTAAGTTCAAACAGAAGTATGGAACTTGGACATGTCTCTCCAAACTCATACAATGGGCCTGCTAGGAATGTTTTTTCAGAGGGGAGAACTTTTGTAACGAGGTTTGACTCTCTTGGAGGTTCTGGAATTTACATACCTTGTGTTTCCCGGATTCGAAGATGTCGTCCAAGGAAAAATATCATGCCTCTTATGGATGATATGATTTCTTCCCTGAAATTCCATCAAAGCGGTGTCATGGTGGAGGTTGCCAACTTAACCAATAAGGCCCTAGGAGAGCATGGATGTCAGGAAGATGAGGGATGGGACAAAGTCTTAAAATCAAGATCTACACCTGCAAAATCTCAGCAGCGATTTACTGTTGAGCAGAAAGATGAACAGTCTCCAGTACTGGACAGAATTGAGCCACGACAGGAATCAAGACTGAGAAAGGCAGATCTATCTAGATATAGTTTAGATGACAACATAGCGACTGTCCCCACTTCAAAAGGTGGAATGAGAAGGAAACATCATAGGGCATGGACCCTTGTTGAGGTGATGAAATTGGTTGAAGGTGTATCACGGTGTGGAGCAGGGAGATGGTCTGAGATCAAACGGCTTTCATTTGCTTCCTACTCATACCGTACGTCTGTTGATCTTAAGGATAAGTGGAGGAATTTGCTTAAAGCTAGCTTTGCGCAGGCAGCTTCAGATGAGGGTATGAACTCACGGAAGCATGGTACAGTCCCCATTCCCGAGCCAATTTTGGTACGAGTAAGAGAGCTCGCCGGGATGAATTCTCAAGTGCCTACAAGCTTCAGCTCAAGCAAACTAACGGCCTGTTCTGTGGTTGCTCATGATGATAGATCAGGGTACTTGTAG 2109 0.4234 MFCSMDVEQVSSFVVLVEKMLTLSFLVLSRLSSLYTGGACEFSIEMLAGIEDNDEGKLEDSGVDRSSSDFSSPKHVANPVVYKLVRVEGDGSLVPATDDELIEVEDFLEYDQIEMGDDVDAGLHEGCSSIERSSSEKLQLECSEDTAEADPGKLNARLQMLQNVKEEEKLHLACVSPGLSYVNEDSQYSAADLPVMDGIIQCDTSFQEIIPSSAPSLNNSHSNQSQSIGGCSRPSEGQIESGSTTSAVYSTLKPDFSMIKGEICLDKLSIRELHELFKVTFGRETTVKDKQWLTRRIAMSLTNSCDVSATTFIVRDNKLVKKSEEGNDGNVDAVLFKDTRAGKEDINCKDSSCAEATGNDDNQVVSVKKLRSHKVEHDLSRESLQTEQRAAKRIRKPTRRYIEELSENESRDYNPRLLSSNRSMELGHVSPNSYNGPARNVFSEGRTFVTRFDSLGGSGIYIPCVSRIRRCRPRKNIMPLMDDMISSLKFHQSGVMVEVANLTNKALGEHGCQEDEGWDKVLKSRSTPAKSQQRFTVEQKDEQSPVLDRIEPRQESRLRKADLSRYSLDDNIATVPTSKGGMRRKHHRAWTLVEVMKLVEGVSRCGAGRWSEIKRLSFASYSYRTSVDLKDKWRNLLKASFAQAASDEGMNSRKHGTVPIPEPILVRVRELAGMNSQVPTSFSSSKLTACSVVAHDDRSGYL 702
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele42g0990 702 CDD SANT_TRF 588 638 - -
Lele42g0990 702 Pfam Myb-like DNA-binding domain 589 637 IPR001005 -
Lele42g0990 702 ProSiteProfiles Myb-like domain profile. 590 637 IPR001005 -
Lele42g0990 702 SMART sant 586 639 IPR001005 -
Lele42g0990 702 MobiDBLite consensus disorder prediction 525 546 - -
Lele42g0990 702 PANTHER MYB-LIKE DNA-BINDING DOMAIN CONTAINING PROTEIN, EXPRESSED 66 684 - -
Lele42g0990 702 Gene3D - 577 685 - -
Lele42g0990 702 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 582 641 IPR017930 -
Lele42g0990 702 SUPERFAMILY Homeodomain-like 584 643 IPR009057 -
Lele42g0990 702 MobiDBLite consensus disorder prediction 213 242 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele42g0990 Lele-ChrLele42 22519444 22526298 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele42g0990 590 648 Single Myb Histone (SMH) Gene Family AT1G17520 40.984 6.00e-06 47.0