Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele42g0979 ATGGATCTCTCACTAAAGGCTTCCAAGTCAGGAGAATTAGGCCCTGCCGCGGCAGAGGACGTCGGAGGAACTGTGATTGCCATTGATAAGGATAAGAACTGCCAACATGCAGTCAAATGGGCCGTAGATAATCTCGTAAAGAACTCATGCATCCTTATCCATGTTCGCACAAAGGGATTTCATCCCCATAATGTTGATGTTGCCCAGAAAGAAGGCGTCCCTGCTTCGGGAGAAGAAATGCATCAATTTTTTCTTCCCTTCCGAGGATTCTGTGCTCGAAAAGGGATAGAAGCAAAGGAGTTGGTTCTGCATGACCTTGATGTCCCAAGCGCCCTTACTTATTATATCATTAACAACTCTATCAGAAACGTTGTTGTTGGTGCTTCTCACCGTAATATTCTTACGAGGAAATTCAAGGATGCAGATGTCCCAACTTGCTTAGTCAAGTCTTTGCCTGAGTCCTGCACAATATACGTTATATCTAAAGGAAAAGTACAAAATATCAAGCCAACATGTCAAAATCAAAATTATTCCATCAAATCGACTAAATCTATAAAAGACAGTCACCAAGGAAGTTCTCGGGCTGATGATTCACCGAGGCTTCCTAGTATCCCAGATTCTGAAGAAGAAAACAGAGATTCAGCCAGCCATGGAAGTGGACAAGGCTCAAGCCTTGATGGAGTATCTAATAGTCGAAATCATACCTCTACACAAAATGTACAGCATGAACCAAATGGAGAAGCTGATTCATCACCAGTATCAAATCAAAATCCATATTCCTTCATTAGTGATATGTCAGGGCCGAATAGTTTTCAATCAAATGATAAGTTCCATGAAAACCAAGAAGTATCCGAGAACTTAGACAGTTGCAGGAGCCTATCTTCAAAAAGCCCAAAAGACTTGGAGAGCGAAATAAGGAAATTAAAACTGGAACTGAGAAAAACAATGGAGAAGTATAGTTTAGCTTGCAAAGAAGCTATTGAAGCAAAAAATAAGGTAATGGAGCTTGAACAGATTAGGGAAGAAGAAGGACGCAACCTAGAAAGAGCTAGGCTCGCTGAAGAGGCTGCATTGGCTTTGACAAAGGTAGAAAGAGAGAAAACCATGGCTGCATTGGAGTCAGCACAAATGGCAAAACTCCTAGCAGAAATGGAGACCGAGAAGAGAAAGCAGGCAGAAACGAAAGCTATGAATGAGGAAGAGGAGAAAATGAAAGCAGTAAATGCACTTGAACAAAATTTTATCCGATGTAGAAGATATGATATTTCAGAAATTGAGGTTGCAACAAATTACTTTGACAATTCAAAGAAAATTGGTGAAGGTGGATATGGACCAGTTTTTAGAGGGAGGCTCGATCACACTGTTGTTGCCATCAAGGTCTTGAGACCAGACATAACATCTGGGGAGAAGCAATTTTTTCAAGAGGTTGAAGTTCTGAGCACCATAAGACATCCTAACATGGTTCTCCTCCTAGGTGCCTGCCCAGAGTATGGATGCCTTGTGTACGAATATTTGGAAAATGGCAGCTTAGAAGACCGTCTCTTCCAGAAAGATAGCACCCCACCAATTCCATGGAAACTTAGATTCCAGATTGCAGCAGAAATTGCCACCGGCCTTCACTTCCTTCACCAAACAAGGCCCGAGCCACTGGTGCATCGAGATCTCAAGCCTGCAAATATACTCTTAGACAAGAACTACAAGAGCAAGATCAGTGATATGGGTTTGGCCAGGCTTGTTCCTCCATCTGTAGCTGACAAAACCACACAATATCGTATGACAGCCGCTGCTGGGACATTCTACTATATTGATCCAGAGTATCAACAAACAGGATTGTTGGGTGTAAAATCAGACATATATTCCTTAGGTGTAATGCTGCTTCAGATTATTACAGCAAAGCCTCCAATGGGTTTGTCTCACCTGGTTGAAAAGGCTATCCAAACGGGCAAATTTCCCGAGGTGCTTGATCCAAGTGTGACAGATTGGCCTGTTGAAGAGGCTTTATCACTTGCTATGTTGGCTTTGAAATGTTGTGAATTGAGGAAACGAGACAGACCAAATCTTGGTTCAGTCATTTTGCCGGAGCTGGATCGACTCAAAGATTTGGAAGAAGACAGATATTTGAAAGAAGACACTAACAGCAATGACAGATTTGAGAGCCGGGTTAGTCAATCAACCTCTACTAATCAGGCAACATGTAGCAATCATAATATGGAAATGGAGAGAAGGCAGAGGAAACCCATGAAGTCTCTGAGCAACAAAAGCAATAGCAGAAGTAAAATAAGAGAAGGATGTCTCTTTCCAGCAACAAGAGAACATGTTGAGGAAGTTACAAATAAGAATTATAGTGATGAGACAGGAAGCTGCTGGTCTTTTGGAACTTGTTCCACCATTCACCCACATTCCTCATAA 2409 0.4197 MDLSLKASKSGELGPAAAEDVGGTVIAIDKDKNCQHAVKWAVDNLVKNSCILIHVRTKGFHPHNVDVAQKEGVPASGEEMHQFFLPFRGFCARKGIEAKELVLHDLDVPSALTYYIINNSIRNVVVGASHRNILTRKFKDADVPTCLVKSLPESCTIYVISKGKVQNIKPTCQNQNYSIKSTKSIKDSHQGSSRADDSPRLPSIPDSEEENRDSASHGSGQGSSLDGVSNSRNHTSTQNVQHEPNGEADSSPVSNQNPYSFISDMSGPNSFQSNDKFHENQEVSENLDSCRSLSSKSPKDLESEIRKLKLELRKTMEKYSLACKEAIEAKNKVMELEQIREEEGRNLERARLAEEAALALTKVEREKTMAALESAQMAKLLAEMETEKRKQAETKAMNEEEEKMKAVNALEQNFIRCRRYDISEIEVATNYFDNSKKIGEGGYGPVFRGRLDHTVVAIKVLRPDITSGEKQFFQEVEVLSTIRHPNMVLLLGACPEYGCLVYEYLENGSLEDRLFQKDSTPPIPWKLRFQIAAEIATGLHFLHQTRPEPLVHRDLKPANILLDKNYKSKISDMGLARLVPPSVADKTTQYRMTAAAGTFYYIDPEYQQTGLLGVKSDIYSLGVMLLQIITAKPPMGLSHLVEKAIQTGKFPEVLDPSVTDWPVEEALSLAMLALKCCELRKRDRPNLGSVILPELDRLKDLEEDRYLKEDTNSNDRFESRVSQSTSTNQATCSNHNMEMERRQRKPMKSLSNKSNSRSKIREGCLFPATREHVEEVTNKNYSDETGSCWSFGTCSTIHPHSS 802
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele42g0979 802 CDD STK_N 24 163 - -
Lele42g0979 802 FunFam Adenine nucleotide alpha hydrolase-like domain kinase 404 504 - -
Lele42g0979 802 MobiDBLite consensus disorder prediction 712 758 - -
Lele42g0979 802 PANTHER OS02G0152300 PROTEIN 25 758 - -
Lele42g0979 802 Pfam Protein kinase domain 433 687 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele42g0979 802 Gene3D Transferase(Phosphotransferase) domain 1 505 725 - -
Lele42g0979 802 FunFam Os07g0541700 protein 505 596 - -
Lele42g0979 802 SUPERFAMILY Adenine nucleotide alpha hydrolases-like 25 149 - -
Lele42g0979 802 Coils Coil 381 410 - -
Lele42g0979 802 Coils Coil 326 353 - -
Lele42g0979 802 ProSitePatterns Serine/Threonine protein kinases active-site signature. 550 562 IPR008271 GO:0004672|GO:0006468
Lele42g0979 802 MobiDBLite consensus disorder prediction 201 215 - -
Lele42g0979 802 SMART serkin_6 432 699 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele42g0979 802 Gene3D Phosphorylase Kinase; domain 1 400 504 - -
Lele42g0979 802 MobiDBLite consensus disorder prediction 717 736 - -
Lele42g0979 802 SUPERFAMILY Protein kinase-like (PK-like) 413 690 IPR011009 -
Lele42g0979 802 MobiDBLite consensus disorder prediction 179 301 - -
Lele42g0979 802 ProSiteProfiles Protein kinase domain profile. 432 695 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele42g0979 802 MobiDBLite consensus disorder prediction 216 277 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele42g0979 Lele-ChrLele42 22433686 22438232 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele42g0979 24 717 Receptor kinase-like Gene Family AT1G17540 47.091 0.0 625
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-IXb Lele42g0979 Pkinase 5.7e-42 CL0016