Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele42g0974 ATGGCTGCATTGGAGTCAGCACAAATGGCAAAACTCCTAGCAGAAATGGAGACCGAGAAGAGAAAGCAGGCAGAAACGAAAGCTATGCATGAGGAAGAGGAGCAGATGAAAGCAGTAAATGCACTTGAACAAAATTTTATCCGATGTAGAAGATATGATATTTCAGAAATTGAGGTTGCAACAATTACTTTGACAATTCAAAGAAAATTGGTGAAGGTTGAAGTTCTGAGCACCATAAGACATCCTAACATGGTTCTCCTCCTAGGTGCCTGCCCAGAGTATGGATGCCTTGAGTACGAATATTTGGAAAATGGCAGCTTAGAAGACCGTCTCTTCCAGAAAGATAACACCCCACCAATTCCATGGAAACTTCGATTCCAGATTGCAGCAGAAATTGCCACCGGCCTGCACTTCCTGCACCAAACAAGGCCCGAACCACTGGTGCATCGAGATCTCAAGCCTGCAAATATACTCTTAGACAAGAACTACAAGAGCAAGATCAGTGATATGGGTTTGGCCAGGCTTGTTCCTCCATCTGTAGCTCACAAAACCACACAATATCGTATGACAGCCGCAGCTGGGACATTCTCCTATATTGATCCAGAGTATCAACAAACAGGATTGTTGGGTGTAAAATCAGACATATATTCCTTAGGTGCAATACTGCTTCAGATTATTACAGCAAAGCCTCCAATGGGTTTGTCTCACCTGGTTGAAAAGGCTATCCAAACCGGCAAATTCCCAGAGGTGCTTGATCCAAGTGTGACAGATTGGCCTGTCGAAGAGGCTTTATCACTTGCTATGTTGGCTTTGAAATGTTGTGAATTGGGGAAACGAGACAGACCAAATCTTGGTTCAGTCATTTTGGCGGAGCTGGATCGACTCAAAGATTTGGAAGAAGACAGATGTGTGAAAGAAGACCCTGACAGCAATGACAGATTGGAGAGCCGGAATCAAGTGGCAACGGGTAGCAATCATAATATGGAAATGGAGAGAAGGCAGAGGAAACCCATGAAGTCTATGAGCAACAAAAGCAGTAGCAGAAGTAAAATAAGAGAAGGAGGTATCTTTTCAGCAACAAGAGAACATGTTGAGGAAGTCACAAACAAGAATCATAGTGATGAGACGGGAAGCTGCTGGTCTTTTGGAACTTGTTCCGCCATTCACCCACATTCCTCATAA 1182 0.4382 MAALESAQMAKLLAEMETEKRKQAETKAMHEEEEQMKAVNALEQNFIRCRRYDISEIEVATITLTIQRKLVKVEVLSTIRHPNMVLLLGACPEYGCLEYEYLENGSLEDRLFQKDNTPPIPWKLRFQIAAEIATGLHFLHQTRPEPLVHRDLKPANILLDKNYKSKISDMGLARLVPPSVAHKTTQYRMTAAAGTFSYIDPEYQQTGLLGVKSDIYSLGAILLQIITAKPPMGLSHLVEKAIQTGKFPEVLDPSVTDWPVEEALSLAMLALKCCELGKRDRPNLGSVILAELDRLKDLEEDRCVKEDPDSNDRLESRNQVATGSNHNMEMERRQRKPMKSMSNKSSSRSKIREGGIFSATREHVEEVTNKNHSDETGSCWSFGTCSAIHPHSS 393
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele42g0974 393 SMART serkin_6 52 296 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele42g0974 393 Gene3D Phosphorylase Kinase; domain 1 26 105 - -
Lele42g0974 393 Pfam Protein kinase domain 72 284 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele42g0974 393 FunFam Os07g0541700 protein 102 192 - -
Lele42g0974 393 MobiDBLite consensus disorder prediction 373 393 - -
Lele42g0974 393 MobiDBLite consensus disorder prediction 303 393 - -
Lele42g0974 393 PANTHER OS02G0152300 PROTEIN 72 349 - -
Lele42g0974 393 ProSitePatterns Serine/Threonine protein kinases active-site signature. 147 159 IPR008271 GO:0004672|GO:0006468
Lele42g0974 393 MobiDBLite consensus disorder prediction 355 372 - -
Lele42g0974 393 SUPERFAMILY Protein kinase-like (PK-like) 68 288 IPR011009 -
Lele42g0974 393 Coils Coil 13 34 - -
Lele42g0974 393 Gene3D Transferase(Phosphotransferase) domain 1 106 322 - -
Lele42g0974 393 ProSiteProfiles Protein kinase domain profile. 7 295 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele42g0974 Lele-ChrLele42 22406204 22408338 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele42g0974 2 301 Receptor kinase-like Gene Family AT5G12000 60.000 8.78e-137 402
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-IXb Lele42g0974 Pkinase 3e-30 CL0016