Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele42g0972 ATGGTGAAATCATTGCGAGCCTTTCGTGTTTACGCCAGCACTTTGACCTCCTTCGACTCTCTCCCAATTGATCTAGGCTTAGGCGAGCTGCACATCGTTCTGGCCTTTGCCAGAGATTACGATGAGAAAGGAAACTTCCTCCCCTATTTTGATATAACAAAGTTGACTCCGGAAGCCATCCTAGGCTTTAAGCAGAGGGCGGCGACGAAGAATCTTAGGGTCAAGTTCTTCTTGAGCATCGGAGGCCGTGACTCCACAATCCACTTCCCCGTCCCTCCTGAAGATGTAGACGACTGGATCGAGAATGCCACCGACAGTCTTAAAAAACTGGTGAAAAGCACGATCTATTTCGACCTGTACAAGGCAAACGAGAAACTTTTTGACTATGTGGTCTACCAGACCCACACTGAGCTTCATCCCATTTGCTCTTCTTGTGACCTCACACTCTTCATTGCAAAACTACCTTATCCCAAAGCAAAGACCTTAGCCGGGTACAGTGACGTCCTATCGTGCGACTGGTCTAAGGTCCCGCCGACCGTCTTCCTCTTTGCCGTTCCTGGGCTCCTTGACTTGGGACTCTATGCGATTTCCAAGTGGATCGTCACCGATTATAACCCTGAGGCCAGAGACCCTCTTCGTGCTGCAATCAGTGTTCGTTCATGTAGAATGCTGCTACTGTCGTCTTGCTATGTAATGTGTGGTGCTTTGCTTTCAAATAAGGTAGAAAGAGAGAAAACCATGGCTGCATTGGAGTCAGCACAAATGGCAAAACTCCTAGCAGAAATGGAGACCGAGAAGAGAAAGAAGGCAGAAACGAAAGCTATGCATGAGGAAGAGGAGAAGATGAAAGCAGTAAATGCACTTGAACAAAATTTTATCCGATGTAGAAGATATGATATTTCAGAAATTGAGGTTGGAACAAATTACTTTGACAATTCAAAGAAAATTGGTGAAGGTGGATATGGACCAGTTTTTAGAGGGAGGCTCGATCGCACTGTTGTTGCCATCAAGATTGCAGCAGAAATTGCCACCGGCCTTCACTTCCTTCACCAAACAAGGCCCGAACCACCGGTGCATCGAGATCTCAAGCCTGCAAATATACTCTTAGACAAGAACTACAAGAGCAAGATCAGTGATATGGGTTTGGCCAGGCTTGTTCCTCCATCTGTAGCTGACAAAACCACACAATATCGTATGACAGCTGCAGCTGCGACATTCTCCTATATTGATCCAGAGTATCAACAAACAGGATTGTTGGGTGTAAAATCAGACATATATTCCTTAGGTGTAATGCTGCTTCAGATTATTACAGCAAAGCCTCCAATGGTTTTGTCTTACCTGGTTGAAAAGGCAATCCAAACGGGCAAATTCCCAGAGGTGCTTGATCCAAGTGTGACAGACTGGCCTATTGAAGAGGCTTTATCACTTGCTATGTTGGCTTTGAAATGTTGTGAATTGGGGAAACGAGACAGACCAAATCTTGGTTCAGTCATTTTGCCGGAGCTGGATCGACTCAAAGATTTGGAAGAAGACAGATATGTTAAAGAAGACCCTGACAGCAATGACAGATTGGAGAGTCGGAATCAAGTGGCAACTGGTAGCAATCATAATATGGAAATGGAGAGAAGGCAGAGGAAACCCATGAAGTCTATGAGCAACAAAAGCAGTAGCAAAAGTAAAATAAGAGAAGGAGATATCTTTCCAGCAACAAGAGAACATGTTGAGGAAGTTACAAACAAGAATTATAGTGATGAGACGGGGAGCTGCTGGTCTTTTGGAACTTGTTCCACCATTCACCCACATTCCTCATAA 1812 0.4492 MVKSLRAFRVYASTLTSFDSLPIDLGLGELHIVLAFARDYDEKGNFLPYFDITKLTPEAILGFKQRAATKNLRVKFFLSIGGRDSTIHFPVPPEDVDDWIENATDSLKKLVKSTIYFDLYKANEKLFDYVVYQTHTELHPICSSCDLTLFIAKLPYPKAKTLAGYSDVLSCDWSKVPPTVFLFAVPGLLDLGLYAISKWIVTDYNPEARDPLRAAISVRSCRMLLLSSCYVMCGALLSNKVEREKTMAALESAQMAKLLAEMETEKRKKAETKAMHEEEEKMKAVNALEQNFIRCRRYDISEIEVGTNYFDNSKKIGEGGYGPVFRGRLDRTVVAIKIAAEIATGLHFLHQTRPEPPVHRDLKPANILLDKNYKSKISDMGLARLVPPSVADKTTQYRMTAAAATFSYIDPEYQQTGLLGVKSDIYSLGVMLLQIITAKPPMVLSYLVEKAIQTGKFPEVLDPSVTDWPIEEALSLAMLALKCCELGKRDRPNLGSVILPELDRLKDLEEDRYVKEDPDSNDRLESRNQVATGSNHNMEMERRQRKPMKSMSNKSSSKSKIREGDIFPATREHVEEVTNKNYSDETGSCWSFGTCSTIHPHSS 603
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele42g0972 603 SUPERFAMILY Protein kinase-like (PK-like) 291 497 IPR011009 -
Lele42g0972 603 MobiDBLite consensus disorder prediction 510 524 - -
Lele42g0972 603 Coils Coil 255 282 - -
Lele42g0972 603 Pfam Protein kinase domain 336 494 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele42g0972 603 ProSiteProfiles Protein kinase domain profile. 183 502 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele42g0972 603 MobiDBLite consensus disorder prediction 556 572 - -
Lele42g0972 603 MobiDBLite consensus disorder prediction 510 572 - -
Lele42g0972 603 Gene3D Transferase(Phosphotransferase) domain 1 327 531 - -
Lele42g0972 603 SMART serkin_6 310 506 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele42g0972 603 PANTHER OS02G0152300 PROTEIN 240 338 - -
Lele42g0972 603 Gene3D Glycosidases 7 115 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele42g0972 Lele-ChrLele42 22388614 22393429 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele42g0972 336 511 Receptor kinase-like Gene Family AT1G78940 69.886 1.75e-78 261
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-IXb Lele42g0972 Pkinase 1.1e-22 CL0016