Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele42g0960 ATGGCTCGCGGGAGAATAAGGGCAAGAATACGGATTAGCAATCTTTACACATTTGCTTGCCTTCGACCCAGAACCACTGAGGAGGGGGCCCATTCCCTTGAAGGCCCAGGGTTCTCACGAACTGTTCACTGCAACCAACCTCATCTCCATGAAAAGAAACCTCTACGTTACCGCCAGAATCATATATCGACTACAAAATATAATGTTATCTCATTTTTGCCCAAGGCTCTCTTTGAGCAATTTCGACGGGTTGCTAATATATATTTTCTTTTGGCTGCTTGCCTCTCGGTCTCTCCAATTTCACCCTTTACACCAGTGAGCATGATTGCTCCTTTGGCATTTGTTGTGGGGCTTAGTATGGCAAAGGAGGCACTGGAAGATTGGCGGAGGTTTCTTCAGGATGTCAAAGTTAATCGTCGGAAAGTTAGTGTCCATAATGGGGATGGTGTTTTTGATTTGAAGGCATGGCAGAAGATAAGGGTTGGAGATGTGGTAAAAGTAGAAAAGGATAAATTTTTCCCTGCTGACTTGCTTCTGTTGTCATCAAGCTATGATGATGGTATATGCTATGTGGAAACTACGAATTTAGATGGTGAAACGAACTTGAAAGTGAAGAGATCTCTGGAGGTTACCTTGCCTCTTGACAATGATGGCGCTTTTAAGGATTTTACAGGAACAATAAAATGTGAAGACCCAAATCCCAATCTCTACACATTTGTTGGTAACATTGAGTATGAACGTCAGGTTTATCCCATTGATCCTATTCAAATTCTCCTCCGAGATTCAAAGCTGAGAAACACTGATCATGTCTATGGGGTGGTCATTTTCACTGGTCATGACAGCAAAGTGATGCAGAATTCTACGAAATCCCCTTCAAAAAGGAGCATGATAGAGAAGAAGATGGATTATATCATATATCTTCTTTTCACGGTCCTTATTTTAATATCTATGATAAGTTCCATAGGATTTGCTATAAAAACCAAGTTTCAAACTCCAGACTGGTGGTACTTACAGCCCAAGGTAGCTGAGTACCAATATAATCCCGACAATGCTAGCTTGGCTGGGATGAGCCATCTTATTACTGCGCTCATTCTTTATGGGTATTTGATACCCATATCACTCTATGTGTCAATTGAGCTTGTGAAGGTTCTACAAGCAAGGTTCATCAACAAAGACTTGCAAATGTTTGATGAAGAAACTGGGACTCCAGCTGATGCACGAACTTCAAATTTGAATGAAGAGCTTGGTCAGGTAGACACTATCCTTTCTGACAAGACTGGCACTTTAACCTGCAATCAGATGGATTTTTTGAAATGCTCCATTGCTGGTACAGCATATGGAGTACGCTCCAGTGAAGTTGAACTTGCTGCAGCAAAGCAGATGGCCTCTAACTTCGAGGAGCAGGAGTCAGATCTCTCTAATTTTCCCATGCCTAAGAATAAAACACGTGGTTTGAATGAAAATAATAGAATAGGTGTTGAAATTGAAATGGAGCCTGTTGTTACTTCTAAGAGTGATGAAAATAGAAAGCCTGCCATAAAGGGATTTAATTTTGAGGACAACCGTATCATGAACTGCAACTGGTTGAAAGAGGCCAATTCTGGTGTTCATTTGTTGTTTTTTCGGATATTGGCAGTTTGCCATACTGCCATTCCTGAGCTGAATGAGGAGACTGGCAGTTTTACATATGAAGCTGAGTCACCTGATGAGGGGGCTTTTCTTGCAGCAGCCAGAGAATTTGGTTTTGAGTTTTGTAAAAGGAATCAGTCGAGTATTTTCATCTGGGAAAGACTGTCTCCTTCTGGACAACCAGTTGAAAGGGAGTACAAAATCCTGAATTTGTTGGACTTCACCAGTAAAAGAAAACGGATGTCTGTGGTTGTACGTGATGAGGACAGCAACATTCTTCTTATGTGCAAGGGAGCAGACAGTATCATATTTGATCGATTGTCAAAGAATGGAAAAACATATTTGGAGGCTACTACTAGACATTTAAATGAATATGGAGAATCTGGTTTGCGAACACTAGCCTTGGCTTATAGAAAACTAGATGAGCAAGAGTACTCTGCTTGGAATAATGAATTCCAGAAAGCCAAAGCAGCTGTTGGGTCTGACCGAGAGGGAACACTTGAACGATTATCAGATGTAATGGAGAGAGAGTTGATTCTTGTTGGAGCTACTGCTGTTGAAGACAAACTGCAGAAAGGGGTGCCCCAATGCATTGACAAACTTGCACAAGCTGGTCTTAAGATCTGGGTGTTAACTGGAGATAAGATGGAAACTGCAATCAACATTGGATTCTCTTGTAGTTTACTTCGACAGGGCATGAAGCAGATATGTATAACTACTATGAACACAGATTCATTAATCAACAGTGGAAAAGAGGCCATCAAGGAGAATATTTTGAACCAAATAACCAATGCCTCACAAATGATCAAGCTGGAGAAAGATCCCCATGCTGCATTTGCATTAATTATTGATGGTAAAACTCTGACATATACATTAGAAGATGATATGAAGCACCAGTTTTTGGGATTGGCAGTGGAATGTGCATCTGTCATCTGCTGTCGCGTGTCTCCCAAGCAAAAGGCGCTGGTAACAAGGTTGGTGAAGGAAGGAACTAGGAAGACCACTCTAGCAATAGGTGATGGTGCAAATGATGTTGGCATGATTCAAGAAGCAGACATTGGTGTTGGTATTAGTGGAGTTGAAGGTATGCAGGCAGTGATGGCCAGTGACTTTGCCATCGCCCAATTTCGGTTTTTGGAGCGTCTTCTGGTAGTCCACGGACACTGGTGTTACAAGAGAATTGCACAAATGATATGCTACTTTTTCTACAAAAATATAGCCTTTGGCCTGACCATATTCTATTTTGAGGCCTTTACGGGTTTCTCCGGGCAATCAGTTTACGATGACTGGTACATGTTACTGTTCAACGTTGTTCTTACGTCATTACCTGTCATCTCACTTGGTGTCTTTGAACAAGATGTTTCATCAGAAGTTTGCTTGCAGTTTCCTGCACTTTACCAGCAAGGACCCAAAAATTTGTTCTTTGACTGGTATAGAATATTGGGATGGATGGGAAATGGTCTCTATTCCTCCCTCATCATCTTCTTCCTCAACGTCATCATCTTCTACGATCAAGCATTCCGTGCCAATGGCCAGACTGCTGACATGGCGGCCGTCGGTACGACAATGTTCACTTGCATCATTTGGGCTGTCAATCTTCAGATTGCCCTGACCATGAACCATTTTACCTGGATCCAACACCTGTTGGTCTGGGGCAGTGTAACATCATGGTACCTATTTCTCTTGCTGTATGGCATGATTTCTCCATACTATTCCAAGAATGCCTACCAAATACTAGTGGAAGCTCTTGGCCCTGCACCTCTTTATTGGATAGCAACCATTTTAGTAACAGTCACTTGCAATCTTCCTTATCTCACCCACATTTCCTTCCAAAGATGTTTTAATCCCATGGATCATCACATCATCCAAGAAATTAAGTATTATAAGAAGGACATTGAAGATCAAAACATGTGGACTAGGGAAAGGTCTAAGGCCAGACAAGAGACAAAGATTGGTTTCACAGCAAGAGTTGAAGCCAAGATCAGGCAGTTGAAAGGAAGGCTGCAGAAGAAGCAATAA 3648 0.418 MARGRIRARIRISNLYTFACLRPRTTEEGAHSLEGPGFSRTVHCNQPHLHEKKPLRYRQNHISTTKYNVISFLPKALFEQFRRVANIYFLLAACLSVSPISPFTPVSMIAPLAFVVGLSMAKEALEDWRRFLQDVKVNRRKVSVHNGDGVFDLKAWQKIRVGDVVKVEKDKFFPADLLLLSSSYDDGICYVETTNLDGETNLKVKRSLEVTLPLDNDGAFKDFTGTIKCEDPNPNLYTFVGNIEYERQVYPIDPIQILLRDSKLRNTDHVYGVVIFTGHDSKVMQNSTKSPSKRSMIEKKMDYIIYLLFTVLILISMISSIGFAIKTKFQTPDWWYLQPKVAEYQYNPDNASLAGMSHLITALILYGYLIPISLYVSIELVKVLQARFINKDLQMFDEETGTPADARTSNLNEELGQVDTILSDKTGTLTCNQMDFLKCSIAGTAYGVRSSEVELAAAKQMASNFEEQESDLSNFPMPKNKTRGLNENNRIGVEIEMEPVVTSKSDENRKPAIKGFNFEDNRIMNCNWLKEANSGVHLLFFRILAVCHTAIPELNEETGSFTYEAESPDEGAFLAAAREFGFEFCKRNQSSIFIWERLSPSGQPVEREYKILNLLDFTSKRKRMSVVVRDEDSNILLMCKGADSIIFDRLSKNGKTYLEATTRHLNEYGESGLRTLALAYRKLDEQEYSAWNNEFQKAKAAVGSDREGTLERLSDVMERELILVGATAVEDKLQKGVPQCIDKLAQAGLKIWVLTGDKMETAINIGFSCSLLRQGMKQICITTMNTDSLINSGKEAIKENILNQITNASQMIKLEKDPHAAFALIIDGKTLTYTLEDDMKHQFLGLAVECASVICCRVSPKQKALVTRLVKEGTRKTTLAIGDGANDVGMIQEADIGVGISGVEGMQAVMASDFAIAQFRFLERLLVVHGHWCYKRIAQMICYFFYKNIAFGLTIFYFEAFTGFSGQSVYDDWYMLLFNVVLTSLPVISLGVFEQDVSSEVCLQFPALYQQGPKNLFFDWYRILGWMGNGLYSSLIIFFLNVIIFYDQAFRANGQTADMAAVGTTMFTCIIWAVNLQIALTMNHFTWIQHLLVWGSVTSWYLFLLLYGMISPYYSKNAYQILVEALGPAPLYWIATILVTVTCNLPYLTHISFQRCFNPMDHHIIQEIKYYKKDIEDQNMWTRERSKARQETKIGFTARVEAKIRQLKGRLQKKQ 1215
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele42g0960 1215 Coils Coil 1197 1215 - -
Lele42g0960 1215 PANTHER PROBABLE PHOSPHOLIPID-TRANSPORTING ATPASE 40 1178 - -
Lele42g0960 1215 SUPERFAMILY Calcium ATPase, transduction domain A 148 286 IPR008250 -
Lele42g0960 1215 FunFam Phospholipid-transporting ATPase 724 921 - -
Lele42g0960 1215 Pfam Phospholipid-translocating ATPase N-terminal 42 109 IPR032631 -
Lele42g0960 1215 TIGRFAM ATPase-Plipid: phospholipid-translocating P-type ATPase, flippase 57 1167 IPR006539 GO:0000287|GO:0005524|GO:0015914|GO:0016020|GO:0140326
Lele42g0960 1215 Coils Coil 448 468 - -
Lele42g0960 1215 Pfam Cation transport ATPase (P-type) 546 651 - -
Lele42g0960 1215 Pfam Phospholipid-translocating P-type ATPase C-terminal 909 1159 IPR032630 -
Lele42g0960 1215 ProSitePatterns E1-E2 ATPases phosphorylation site. 424 430 IPR018303 -
Lele42g0960 1215 SFLD p-type atpase 405 932 IPR044492 -
Lele42g0960 1215 Gene3D - 119 288 - -
Lele42g0960 1215 Gene3D - 720 921 IPR023214 -
Lele42g0960 1215 FunFam Phospholipid-transporting ATPase 591 722 - -
Lele42g0960 1215 SUPERFAMILY Metal cation-transporting ATPase, ATP-binding domain N 523 686 IPR023299 GO:0000166
Lele42g0960 1215 TIGRFAM ATPase_P-type: HAD ATPase, P-type, family IC 853 962 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Lele42g0960 1215 FunFam Phospholipid-transporting ATPase 118 288 - -
Lele42g0960 1215 SFLD C1.7: P-type atpase like 405 932 - -
Lele42g0960 1215 Gene3D - 434 469 IPR023299 GO:0000166
Lele42g0960 1215 Gene3D - 586 698 IPR023299 GO:0000166
Lele42g0960 1215 SUPERFAMILY Calcium ATPase, transmembrane domain M 55 1149 IPR023298 -
Lele42g0960 1215 SUPERFAMILY HAD-like 410 925 IPR036412 -
Lele42g0960 1215 Gene3D - 419 433 IPR023214 -
Lele42g0960 1215 CDD P-type_ATPase_APLT_Dnf-like 59 1040 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele42g0960 Lele-ChrLele42 22291213 22297064 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele42g0960 1 1215 Primary Pumps ATPases AT1G17500 75.658 0.0 1938