Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele42g0954 ATGGGTGGTTCCGGAAAGTGGTTGAAATCACTCATTTCTTCAAAAAAGCCCTCCCCAAACGATCGAGAAAACACTGGTGGTGATAAGAGCAAGAAGAAATGGAGGCTATGGAGGAACTCTTCTGAGGGGATGGGATCATCCACGAAGGGCACAACGAAGAAGAAAAACGGGGTCGTTTCAGACAAGTCGGACTCTCTGTCGAATGATGCATTTACTGCTGCCATGGCTGCTGTGGTCCGAGCTCCTCCCAAAGGTTTCTTGTTGATCAAACAGGAATGGGCTGCCATTCGCATTCAGGCCCTGTTTCGAGGATTCTTGGCGAGACGAGCTTTGAGGGCCTTAAGGGCAGTGGTGAGGATTCAAGCTATATTTCGAGGGCGGCAAGTGAGGAAGCAAGCAGCAGTAACTCTGAGGTGCATGCAGGCTCTTGTCAGAGTTCAGGCTCGTGTGAAAGCAAGGAGTGTGAGCTTGTCTCCAGACAGGAAACACACTCAAGCTAATTCTCCTAAGCAGTCTGAGAGAGGATGGTGTGACATTCCAGGAAGTGTCGATGAAATCAAAGCAAAGCTTCAAATGAGACAAGAAGCAGCCATCAAAAGGGAGAGAGCAATGGCTTACTCTCTCTCTACACAGCAATCAAGAGGGAGTGCTAGTCCAAACTCAAGAATAACATCAAGGCCAGTGTCTCCACTCAAGCATGACAGTCTAGACAGTAGGAGCTTGTTAGAGCGGTGGATGGCAGCGAAGCCATGGGAAAACAGGTTGAAGTCGGAGAGATACTTTGGTTCACCGGACCGGACTCCATTATCAAGGAAAAGTGACAACTTTGTTCTTCCCAGAGCAAGAAAGAATGCTGTGACAACCAGGGTTTCACTAAAACCTCCCATGACCAGCCTATCAGCACCATCATCATTATCTTCATCTTCTGCTATAAGTTCTGAATGCATGTATGATGATAGCCCTATTTCAGCTTCATGCACATCCCCCGAGGAAAACAGCGTTCCTAAACCGAGCCTCATGAACTTCACCGAGTCAACCAAGGCTAAACAGAGAGCCTGCAAGTGTTCCTCTCTGAATGGAGATGCAAGAAGCACTACTTCAGGTCCTGATCCTTCTGTTAATTTTTGGAGAGACTGTTATGCAACTCCTCAAAGGGCAAGTTATCAGAGAAGATCCTCCAGGAGATGA 1188 0.4773 MGGSGKWLKSLISSKKPSPNDRENTGGDKSKKKWRLWRNSSEGMGSSTKGTTKKKNGVVSDKSDSLSNDAFTAAMAAVVRAPPKGFLLIKQEWAAIRIQALFRGFLARRALRALRAVVRIQAIFRGRQVRKQAAVTLRCMQALVRVQARVKARSVSLSPDRKHTQANSPKQSERGWCDIPGSVDEIKAKLQMRQEAAIKRERAMAYSLSTQQSRGSASPNSRITSRPVSPLKHDSLDSRSLLERWMAAKPWENRLKSERYFGSPDRTPLSRKSDNFVLPRARKNAVTTRVSLKPPMTSLSAPSSLSSSSAISSECMYDDSPISASCTSPEENSVPKPSLMNFTESTKAKQRACKCSSLNGDARSTTSGPDPSVNFWRDCYATPQRASYQRRSSRR 395
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele42g0954 395 ProSiteProfiles IQ motif profile. 91 119 IPR000048 GO:0005515
Lele42g0954 395 MobiDBLite consensus disorder prediction 1 62 - -
Lele42g0954 395 MobiDBLite consensus disorder prediction 21 38 - -
Lele42g0954 395 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 86 133 IPR027417 -
Lele42g0954 395 MobiDBLite consensus disorder prediction 40 54 - -
Lele42g0954 395 Gene3D - 88 143 - -
Lele42g0954 395 ProSiteProfiles IQ motif profile. 115 142 IPR000048 GO:0005515
Lele42g0954 395 MobiDBLite consensus disorder prediction 205 234 - -
Lele42g0954 395 Pfam IQ calmodulin-binding motif 115 132 IPR000048 GO:0005515
Lele42g0954 395 Pfam IQ calmodulin-binding motif 93 112 IPR000048 GO:0005515
Lele42g0954 395 MobiDBLite consensus disorder prediction 353 375 - -
Lele42g0954 395 PANTHER IQ-DOMAIN 5-RELATED 1 371 - -
Lele42g0954 395 MobiDBLite consensus disorder prediction 205 228 - -
Lele42g0954 395 SMART iq_5 90 112 IPR000048 GO:0005515
Lele42g0954 395 SMART iq_5 113 134 IPR000048 GO:0005515
Lele42g0954 395 MobiDBLite consensus disorder prediction 154 178 - -
Lele42g0954 395 MobiDBLite consensus disorder prediction 353 372 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele42g0954 Lele-ChrLele42 22255112 22257442 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele42g0954 1 384 IQD Protein Family AT1G72670 47.381 1.23e-94 288