Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele42g0950 ATGGCATGTTCTTCTCAGCTTTCTGGCATAAAATATGATGTTTTTATCAGCTTCCGAGGCACAGAAACACGCCATGGTTTTCTTAGTCATTTGAAGAAGGAATTGCGGCAGAAACAAATCGATGCCTACGTGGACGACAGACTTGAAAGTGGAGAACAAATATCACCGGCACTTATAAGAGCCATCAAAGACTCACTCATGTCATTAATCATATTTTCAAAGGATTATGCTTCTTCAAGGTGGTGTTTAGAAGAGCTGGTGCAGATTATTGAGTGTATGGAGAAGCAGAAACAGATGGTGATTCCTGTTTTCTATAACACAGATCCCTCACATGTGAGGCATCAAAAAGGGTCTTATGGAGATGCTTTTGTCAAACATGACAAAAATCACAAGGAAAAGGTGCCAATTTGGAAATCAGCTTTGAATAAAGCGGCTAATTTGTCTGGGTTTCATTCATCAAATTATGAGGACGAGGCTGAGCTTATAGAAGTAGTTGCCCAGTGTTTGTCAACAAGGTTGAATATTATGTTCCAAAGTGACTTAACAGGCCTTGTTGGAATTGATGAAAGGATTGCAGATTTAGAATCACTAATGAACCAAGGCTCAGAAGATGTTCGAGTCATTGGAATTTGGGGCATGGGCGGTATCGGTAAGACAACCATGGCAACTGCAGTATTTAATAGAGTCTATTTTGAATATGAAGGATATTGTTTTTTGGCAAATGTGAGAGAAGAATCAGAGAATCATGGCATTATGTATTTGAAGAATAAAATTCTTTCTATACTACTCAAGGAAAATGATTTGAATATTGGTACACCAAATGGAATACCCCCTTATGTTAGGAGAAGGCTTCTTCGGAAAAGGGTTCTTGTTGTTCTTGATGATATTAGTGATTCTGATCAACTGGAAAATTTAGTGGGAGCTCTTGATTGCTTTGGATCTGGTAGTAGAATCATTATAACAACAAGGGATAAGCAAGTGCTAGCTAAAGGAGTTCATAAAATATACGAGGTTAAGCCATTGATGTTTGATGCTGCTGCTCAACTTTTTATGTCAAATGCCTTTGAGAATAATTATCTAGACATGGAGTGGATTGAACTATCAAGGAAGGTGATTAGTTATGCTAAAGGCATTCCGTTGGCTTTGAAAGTTTTGGGTTCCTTTCTTTATGGTAAATGCAAGGAAGAATGGGAGAGCCAACTTGAGAAGCTCAACAAAATGCCGCATGCAAAAATCCAGGATGTGATGAGATTGAGTTTTGATAAACTAGATAGGGAAGAGAAGAATATTTTCTTGTATGTTGCATGTTTCCTCAAAGGATATAAATCACAGCAAATAGTAGTTTTACTAAATGCTTGTGGTTTTTCATCAATTATTGGGTTAAAAGTCCTTCGAGACAAAGCTCTTATCACTGAAATCAAAGGATCAAGCTCAGGAGCATCAAGAATATTTATGCATGATTTGATACAGGAAATGGGTTGGGAGATTGTTCGTGAAGAATCAATTCATGATCCTGGAAAACGCAGTCGATTATGGGATGCTAATGATATATATCGAGTATTGGAACATAACCTGGGGACTAAAGCCATTCAAAGCATAACTTTGAATGTGGCGAAAATTGAAGAGCTCTGCTTAACTCCTCAAGTCTTTGCTGAGATGTCTGAGCTAAAATTTCTTAGTTTTTCCCAGAATGATGTAGATGAACAAATCCTACGCCTTCCTCATGGCCTTGAATCTTTGCCAAATGAACTGAGGTTCCTTCATTGGGATTGCTGTCCTTTAAAATCCTTACCTTCCACATTTCGTCCAGAAAGTCTCATTGAACTTAACATGACTTCGAGTCGTGTGGAAAAACTTTGGGATGGAGTTCTGCATCTTGTGAATTTGAAGAAAATTGACCTCAGTAACTCCAAGCATCTACTGGAACTCCCAGATTTTTCTATGGCCAAAAATCTTGAAGAAGTTGAACTCTACAACTGTAAAAGCTTGCGTAAGGTTCATCCTTCTATTTTAACCGTCGACAAGCTTCTGAATTTGAACCTGTCATATTGCAAATCACTTACCAGCCTTAGAAGTGATGTCCATTTAAGATCCCTGAGTAACCTTTCTCTTGGTGAATGCTCAAGGCTCAAGGAATTCTCAGTGACATCAGAGAATATGAGGAACTTGAGTTTGGCAGGCACAGCTATCAATGAATTGCCTTCATCCGTGAGGCTTCTAAACAAACTTGAAACGTTCGACTTGCAGCGTTGTAAAAACCTTAAGAATCTTCCAAACAAGTCAGCTAACCTGAGTTCTCTTCGAGAACTTAGGATATATGGTTGCATGCAGCTTGATGCATCGAATTTACGCTTCCTACTTGATGGCTCAAGGTTCCTAGAAACATTGTTACTTCAAGATTGTCATAATTTATTTGAACTTCCAGACACCATCAGATTCTTATCCTCATTGAAGATTTTATCCCTAAATGAAACTGATATTGAGAGGTTGCCTGCAAGCATCAAGCATCTTCCACAGCTTGAAAAACTTGATTTGAGTAATTGTAGGAGGCTTCAGTCTTTGCCTCATCTTCCACTAACCGTTAAAGAACTACATGTCACTAACTGCACTTCCCTGGAGAGAGTAATGTTTTCTTCAATGGCTGCTGATCATCTGAAGGAAAAAATACGAGTTAGCACTAGTTTCCAGAATTGCGTGAACTTGGATGCAGATTCACTCAGGGCTATAGGAGTAAATTCTCATGTCAACATTAAGAGATTGGCATATGAACAGTTATCAACTCTGGGGAAAAGTAAGATCCTAGATGGTCCAGTTGATGTTATTTATCCAGGAAGCAATGTTCCAGAGTGGTTCATCAACAACAGGACAAGGCAGTCTTCAGTAACTATTGACTTATCTTCTGCTCCACCTTCCATGTTTCTGGGTTTCATTTTTTGTGCTGTTGTCTGTAAGTTCCCATCAAATGACAAGAACCTCGTCGGATGTGACTGCTACATGGAAATTAATGGTAAAAGGGACAAGAACATGGGTGCATGGACAAGCATATCTGCTTGTGAATTCATGTCTGATCATGTATGTCTGTGGTATGATGAACGATGTTGTCTGAAAACTAATGAAAGCAAGGAAGAAGATGAAACTAATAGCAAGAAAATATCATTTGAGTTCTTTGCACAAACTGGGAATATTTGGGAGAAGAAAAAGGATATTGTGATAAAAAAGTGTGGAGTCTGCCCGGTATATGCCTCAGAATATGACAAATTCATTGAGGAAATGGAGTTGGAGTTGGAGTTGAAGTCAGAGCTTAAAGCAATTGAAATGGGAGTTAGTGGAAGTTTTGATGAGAAGAAAAATGAGGAGACCGTCCCTTTAGCTAAAAAATCCAATCAATATATCTTCCCACCACTTCCAAATGGAACTTGGAAGAAAGCAGCACAAGGCTTAAAAGATCTCATCAACTTGTAA 3462 0.3853 MACSSQLSGIKYDVFISFRGTETRHGFLSHLKKELRQKQIDAYVDDRLESGEQISPALIRAIKDSLMSLIIFSKDYASSRWCLEELVQIIECMEKQKQMVIPVFYNTDPSHVRHQKGSYGDAFVKHDKNHKEKVPIWKSALNKAANLSGFHSSNYEDEAELIEVVAQCLSTRLNIMFQSDLTGLVGIDERIADLESLMNQGSEDVRVIGIWGMGGIGKTTMATAVFNRVYFEYEGYCFLANVREESENHGIMYLKNKILSILLKENDLNIGTPNGIPPYVRRRLLRKRVLVVLDDISDSDQLENLVGALDCFGSGSRIIITTRDKQVLAKGVHKIYEVKPLMFDAAAQLFMSNAFENNYLDMEWIELSRKVISYAKGIPLALKVLGSFLYGKCKEEWESQLEKLNKMPHAKIQDVMRLSFDKLDREEKNIFLYVACFLKGYKSQQIVVLLNACGFSSIIGLKVLRDKALITEIKGSSSGASRIFMHDLIQEMGWEIVREESIHDPGKRSRLWDANDIYRVLEHNLGTKAIQSITLNVAKIEELCLTPQVFAEMSELKFLSFSQNDVDEQILRLPHGLESLPNELRFLHWDCCPLKSLPSTFRPESLIELNMTSSRVEKLWDGVLHLVNLKKIDLSNSKHLLELPDFSMAKNLEEVELYNCKSLRKVHPSILTVDKLLNLNLSYCKSLTSLRSDVHLRSLSNLSLGECSRLKEFSVTSENMRNLSLAGTAINELPSSVRLLNKLETFDLQRCKNLKNLPNKSANLSSLRELRIYGCMQLDASNLRFLLDGSRFLETLLLQDCHNLFELPDTIRFLSSLKILSLNETDIERLPASIKHLPQLEKLDLSNCRRLQSLPHLPLTVKELHVTNCTSLERVMFSSMAADHLKEKIRVSTSFQNCVNLDADSLRAIGVNSHVNIKRLAYEQLSTLGKSKILDGPVDVIYPGSNVPEWFINNRTRQSSVTIDLSSAPPSMFLGFIFCAVVCKFPSNDKNLVGCDCYMEINGKRDKNMGAWTSISACEFMSDHVCLWYDERCCLKTNESKEEDETNSKKISFEFFAQTGNIWEKKKDIVIKKCGVCPVYASEYDKFIEEMELELELKSELKAIEMGVSGSFDEKKNEETVPLAKKSNQYIFPPLPNGTWKKAAQGLKDLINL 1153
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele42g0950 1153 SUPERFAMILY L domain-like 485 884 - -
Lele42g0950 1153 ProSiteProfiles TIR domain profile. 10 173 IPR000157 GO:0007165
Lele42g0950 1153 Gene3D - 341 424 IPR042197 -
Lele42g0950 1153 Gene3D Ribonuclease Inhibitor 719 906 IPR032675 -
Lele42g0950 1153 Gene3D Ribonuclease Inhibitor 500 718 IPR032675 -
Lele42g0950 1153 PRINTS Disease resistance protein signature 375 389 - -
Lele42g0950 1153 PRINTS Disease resistance protein signature 207 222 - -
Lele42g0950 1153 PRINTS Disease resistance protein signature 283 297 - -
Lele42g0950 1153 PRINTS Disease resistance protein signature 835 851 - -
Lele42g0950 1153 Pfam NB-ARC domain 195 410 IPR002182 GO:0043531
Lele42g0950 1153 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 171 433 IPR027417 -
Lele42g0950 1153 SUPERFAMILY Toll/Interleukin receptor TIR domain 4 150 IPR035897 -
Lele42g0950 1153 Gene3D - 177 335 IPR027417 -
Lele42g0950 1153 FunFam Disease resistance protein (TIR-NBS-LRR class) 8 175 - -
Lele42g0950 1153 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 12 766 IPR044974 GO:0006952
Lele42g0950 1153 Pfam TIR domain 11 186 IPR000157 GO:0007165
Lele42g0950 1153 Pfam C-JID domain 942 1083 IPR045344 -
Lele42g0950 1153 Gene3D - 9 176 IPR035897 -
Lele42g0950 1153 SMART till_3 11 147 IPR000157 GO:0007165
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele42g0950 Lele-ChrLele42 22213794 22217521 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele42g0950 743 879 WRKY Transcription Factor Family AT4G12020 37.143 2.31e-08 57.0