Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele42g0943 ATGATGAAGGGTTTGATGTTTCACCAGCAACAGCAACAACAAGTAGGGGAAGAGAACATGTCTAATTTGACTTCTGCATCTGGTGAAGCCAGTGTTTCCTCAGGCAATAGAAATGAAATTGGTACCAATTATCCTCCACAACAACAATACTTTGCTTCACCACCAACTCAAACTCAAACCCAGACCCTGAAGAAAAAGAGAAACCTTCCTGGGAATCCAGACCCAGATGCTGAAGTTATAGCCTTGTCTCCCAAGAGTCTTCTGGTAACAAACAGGTTCATATGTGAGATCTGCAACAAAGGATTTCAGAGAGACCAGAATCTGCAACTTCATAGAAGAGGGCACAATCTGCCATGGAAGCTGAAGCAGAGAACAAACAAAGAAGTGAGGAAGAAGGTGTATGTGTGCCCAGAACCCACATGTGTGCACCATGACCCAGCAAGAGCACTTGGGGACCTAACTGGGATAAAGAAGCACTTCTGCAGAAAGCATGGAGAGAAGAAGTGGAAATGTGATAAATGCTCTAAGAGGTATGCAGTTCAATCAGATTGGAAAGCTCACTCCAAGACCTGTGGCACAAGAGAGTACAGATGTGACTGTGGAACCCTCTTCTCAAGGAGAGACAGTTTCATAACACACAGAGCCTTCTGTGATGCATTGGCAGAGGAAAGTGCAAGATCTTCAAACCCACTTCTTCATCCTCAAACACCACCCAGTTCTTCATCATCAGCATCTCGCATTCTGAATCTCCAAACCCAACTGAATAATCATCACCAAGATCTCCATTCTTTACAACCGAAGAAAGATCATCAACAACAACAACAAAGCTTCATCAACCTCAGGCCAGAAATACCCCCTTGGCTAGCTCCTCCAGCTGGGCCATCATCCACCAGCATTGACCTCTCTTCCCCATCGTCATCTTCAATCTTCTCCACAAGATTTGATCAGGACTTTTCAAGAACACCTCACGGGCAGCAGCAGCAAGATCTGAGCCTGCTCCATGAAAACCCTAACCCTACTAGTAGCCAGCTTGGACCCACCCTCCCTCCTGCCTACCAACCAGCGCCTTCCCCGCACATGTCAGCAACAGCCTTGTTGCAGAAAGCAGCACAAATGGGTGCAACCATGACTACCAAAACACAACCAGCTGTCTTGATTAGGACCCACCATCAGACTCACGTGCCTCTTATTCCTGACTCTTTTTCTGGTGTGACCAATTCAATCTCATCAACTAGTGGTAATTTTGGTTTGAATTTGTCATCACGTGAATCTGCAGTACTTCTCCCTCCTCCTTCTGCGTCTTCTGCTTCTGCTAGTACTGTTTCTCCTTCTTCCTCAGGTGTTCTTCCTCCTCCTCCTCCGTTTCTTCTTCATGATGTTATGAGTTCTTTCTCTGGTGGTGGTGGGTTTGAAGGAACGTCTTTTGAGGATGCTTTTGGTGGGATTTTGAACTCAAAGAATAATAAAGACGGAAGCTTTCTTGATACCCTTACAAAGGCAACAAGTGCCCCCGCCGGCGCCGCCGATGTCGGTGGTGGGAATGAAGGTTTGACGAGAGATTTCTTGGGTCTTAGACCTCTCTCCCACAATGAGATCCTCAGCTTTGCTGGAATTGGAAACTGCATGAACCCATCTTCCCATGATCAACAGAAACAATCCCAAAAACCATGGCAAGTGAAAGATGCTGTGGCAATTGTGGTAAAGGGTCTAGACTACAAGAGCACTCGCAACAATCTGGAATCAACCGTCGAGAATTTTAGCAAAAAGAGCATACTTTCTCAAGAGCACACTTCCCTAGAAGGGTTCGTCTCTCTTGAAATACAAATGGAGATGTTTATGCTTCTCACTCAAATCCTCTCCATGCTCACTTCTCAAGCTCTGGGATTGGATGGAAATTCTATGCAAGAGCTGAAGGCTAGGCTGCTCTATGGTGCTGACCAAGTTCTTAACTTGTATGCAAACTTATACAACAGTGTTGGTCTTGAAAACTACGAGATTTTTGTGTTCCATAATGAACATGACGAGTTTAAGGAGGGTGTCAAGGGTTCCATACTATTTGATTTGGAGAAAATGGCAGATGCAGATGCTTCACTTATTTGGGATTTGGTGAAAGATGCTTTGGCTATTGTGGGAAAGGGTCTTGAATACAAGAGCACTCGCAAGAATCTGGAGTCAGCCGTCAAGGACTTGAGTCCACTGGTTGAAAAGATCGAACATTCCATTAATCAGATGAATCTCCCTACTGAACATATTCAGAAACTGAAGCAGATATTGGCAACAAACAGAGACGCTCTTGGAAAGAACAAAATCCATTGGTGGAATTGTGTCCTTACGCCATGGTTTCAGTGGAAGCTTTCAAGAGAACACACTTCTCTAGAAAGGTTCATCTCTGTTCAAACACAAATTCACATGCTTCAGCTTCTCACTCAAATCCTCTCTGTTCTGAGTTCTCAAGGTCGCAGCAATGATTGCCCAACCAATTCAGCTCACGACAACAACAACAGGACACTGATATCCAAGGATCATCATCTTGATGCGAGATTCCCCAGATTTACTGTGGGATTGGATGGTGATTCTATGCAAAAGTTGAAGGCTAAGCTGCTTAATGGTGATGAACAAGTTCTTAACTTGTATGGTATCCCAGGATCCGGGAAGACCACTGTGGCTAAAAAACTGTGTTATGATCTTCAAGTCATAGGTAGTTGTCTTGTCTCTCATATTCAGAGCGAAGAAGCAATCAACATGTTGCAGGATCAGCTATCTCCATGTGGCGAAGATGAAGTACTGCTGGTATTGGATGATGTTTGGCCTTGCTCTGAAAATATTGTTGAAATGATAAATCTAAAATCACCAGGTTCTAGAATTCTGGTGACTTCAAGAGCTAAAATGACAAAAGTTAAAACCCCATGCCTCATGAAACTACTCTGCGACGAAGATGCAGAAAAACTTCTCCTTCACTTAATTCAACCGAGTCCCATCGACTTTGATGACCCAGAAAGGCGTAAAATTCTCCTCCAGATACTTGAAGGTTGCAAGGGTTTACCTTTGGCACTTGAATTCATTGGTGGTAAACTCCAAGGGAAACATATTGAAGCATTTCAGAATGTGCAGTTAGAATGGTCGAGAGGTCACTCTATACTTAAATCCCATGAAGACTTGCTTGCTCGTCTGCAAAATTCTGTAGATGAATCCATCAAGGAGTTCTTTATGGATCTTGGGTTATTTCCTGAAGATCAAAAAATCCCCATTACTGCACTTATAGACATGTGGGTTGAACTGTTGGACCTAAATAAACCTGCAACTGCAAGGTTATCTGCAATGCTCACCATCCAAGATTTAATAGCCATGAATCTGGCTGCCGGCATCAAAGTTAGAAGGATTGTTGGACGGGACGACGTGGACAATTATTATAATAACCAATTCCTCATGCAGCATGATGTTTTCAGAGAGCTAGCCATCCATATGAGCCAACAAGAACCATTAGAGAATAGAAAAAGACTCATCATTGAAATGTATGGGAATCTGAATGATCCTCCCAAATGGTGGCCCAAGCAACAACAAAGTTTAACTGCTCCTCCTATTCTGTCAATATCAACAGATCAAAGCATCACTCCAGATTGGTGCTGCAACATTCAAGCAGCTGGTACTGTGGTTCTGGTCTTAAATTTTAAGACTAAAGAATACACTTTACCAGAATTTATTAAGGGAATGGAAAACTTGAAAGTTCTTATAATCACCAATTATGGTTTCTGTAAAACTGACTTAAGAAACTTGGAGCTACTTGGTTCCTTAATGAGCCTTAAAAGAATCAGATTGCAGCAAGTTTCAATTCCATGCCTGTCTGATCTGAAGAATGTGCACAAGCTATCACTTTACATGTGTGAGGTGAAGAAGGCTTTTGAGAACAGTTCCATTGAATTCTCAGAAGCAATGCCAAAACTGGAAGACTTGAGCATCGAGTATTGCCAAGATTTCGTGAAGTTGCCTTCTGGGCTATGCGATATCGTCACCATGAAGAACCTCACCATAAGTAGTTGCCACAACTTCATCAGACTCACTGAAGAAATTGGGAAGCTTGAGAATCTGGAATTACTGAGGATTAATTACTGCTCTGGTTTTGAAGAAATGCCAGAATCAATCACAGAGCTGAACAATCTAAGCTTTCTGGACATATCATTCTGTGTAAACCTTAATAAGTTACCAGACAAGATTGGTGAGCTGCAGAATCTGAACAAGCTTTATATGACGGGTTGCCCAATACGTGAATTGCCAGATTCAGTCAAGAAGTTTAGGAATTTAGAGAGTGTGATATGTGATGAGCTTGCATTTCACTTGTGGAAAGATATCGTATCTTCCTCTTCCAAACTAAACATTAAGATGGCCGACATGGATGTGAGCTTAAATTGGCTTTCTTGA 4416 0.4278 MMKGLMFHQQQQQQVGEENMSNLTSASGEASVSSGNRNEIGTNYPPQQQYFASPPTQTQTQTLKKKRNLPGNPDPDAEVIALSPKSLLVTNRFICEICNKGFQRDQNLQLHRRGHNLPWKLKQRTNKEVRKKVYVCPEPTCVHHDPARALGDLTGIKKHFCRKHGEKKWKCDKCSKRYAVQSDWKAHSKTCGTREYRCDCGTLFSRRDSFITHRAFCDALAEESARSSNPLLHPQTPPSSSSSASRILNLQTQLNNHHQDLHSLQPKKDHQQQQQSFINLRPEIPPWLAPPAGPSSTSIDLSSPSSSSIFSTRFDQDFSRTPHGQQQQDLSLLHENPNPTSSQLGPTLPPAYQPAPSPHMSATALLQKAAQMGATMTTKTQPAVLIRTHHQTHVPLIPDSFSGVTNSISSTSGNFGLNLSSRESAVLLPPPSASSASASTVSPSSSGVLPPPPPFLLHDVMSSFSGGGGFEGTSFEDAFGGILNSKNNKDGSFLDTLTKATSAPAGAADVGGGNEGLTRDFLGLRPLSHNEILSFAGIGNCMNPSSHDQQKQSQKPWQVKDAVAIVVKGLDYKSTRNNLESTVENFSKKSILSQEHTSLEGFVSLEIQMEMFMLLTQILSMLTSQALGLDGNSMQELKARLLYGADQVLNLYANLYNSVGLENYEIFVFHNEHDEFKEGVKGSILFDLEKMADADASLIWDLVKDALAIVGKGLEYKSTRKNLESAVKDLSPLVEKIEHSINQMNLPTEHIQKLKQILATNRDALGKNKIHWWNCVLTPWFQWKLSREHTSLERFISVQTQIHMLQLLTQILSVLSSQGRSNDCPTNSAHDNNNRTLISKDHHLDARFPRFTVGLDGDSMQKLKAKLLNGDEQVLNLYGIPGSGKTTVAKKLCYDLQVIGSCLVSHIQSEEAINMLQDQLSPCGEDEVLLVLDDVWPCSENIVEMINLKSPGSRILVTSRAKMTKVKTPCLMKLLCDEDAEKLLLHLIQPSPIDFDDPERRKILLQILEGCKGLPLALEFIGGKLQGKHIEAFQNVQLEWSRGHSILKSHEDLLARLQNSVDESIKEFFMDLGLFPEDQKIPITALIDMWVELLDLNKPATARLSAMLTIQDLIAMNLAAGIKVRRIVGRDDVDNYYNNQFLMQHDVFRELAIHMSQQEPLENRKRLIIEMYGNLNDPPKWWPKQQQSLTAPPILSISTDQSITPDWCCNIQAAGTVVLVLNFKTKEYTLPEFIKGMENLKVLIITNYGFCKTDLRNLELLGSLMSLKRIRLQQVSIPCLSDLKNVHKLSLYMCEVKKAFENSSIEFSEAMPKLEDLSIEYCQDFVKLPSGLCDIVTMKNLTISSCHNFIRLTEEIGKLENLELLRINYCSGFEEMPESITELNNLSFLDISFCVNLNKLPDKIGELQNLNKLYMTGCPIRELPDSVKKFRNLESVICDELAFHLWKDIVSSSSKLNIKMADMDVSLNWLS 1471
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele42g0943 1471 MobiDBLite consensus disorder prediction 1 77 - -
Lele42g0943 1471 ProSitePatterns Zinc finger C2H2 type domain signature. 95 115 IPR013087 -
Lele42g0943 1471 MobiDBLite consensus disorder prediction 1 67 - -
Lele42g0943 1471 PRINTS Disease resistance protein signature 1381 1397 - -
Lele42g0943 1471 PRINTS Disease resistance protein signature 1011 1025 - -
Lele42g0943 1471 PRINTS Disease resistance protein signature 874 889 - -
Lele42g0943 1471 ProSiteProfiles Zinc finger C2H2 type domain profile. 93 115 IPR013087 -
Lele42g0943 1471 Gene3D Ribonuclease Inhibitor 1196 1470 IPR032675 -
Lele42g0943 1471 MobiDBLite consensus disorder prediction 283 359 - -
Lele42g0943 1471 Pfam Arabidopsis broad-spectrum mildew resistance protein RPW8 711 817 IPR008808 -
Lele42g0943 1471 MobiDBLite consensus disorder prediction 429 445 - -
Lele42g0943 1471 PANTHER PLANT BROAD-SPECTRUM MILDEW RESISTANCE PROTEIN RPW8 703 1470 IPR039203 GO:0050832
Lele42g0943 1471 SUPERFAMILY RNI-like 1227 1440 - -
Lele42g0943 1471 SMART c2h2final6 169 189 IPR013087 -
Lele42g0943 1471 SMART c2h2final6 93 115 IPR013087 -
Lele42g0943 1471 SMART c2h2final6 134 164 IPR013087 -
Lele42g0943 1471 Gene3D - 1057 1152 IPR036388 -
Lele42g0943 1471 Gene3D Classic Zinc Finger 91 191 - -
Lele42g0943 1471 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 860 1071 IPR027417 -
Lele42g0943 1471 MobiDBLite consensus disorder prediction 295 348 - -
Lele42g0943 1471 Pfam NB-ARC domain 927 1032 IPR002182 GO:0043531
Lele42g0943 1471 FunFam protein indeterminate-domain 12-like 72 140 - -
Lele42g0943 1471 Gene3D - 833 903 IPR027417 -
Lele42g0943 1471 Gene3D - 904 969 IPR027417 -
Lele42g0943 1471 FunFam protein indeterminate-domain 5, chloroplastic-like 147 226 - -
Lele42g0943 1471 MobiDBLite consensus disorder prediction 429 450 - -
Lele42g0943 1471 Coils Coil 1047 1067 - -
Lele42g0943 1471 SUPERFAMILY beta-beta-alpha zinc fingers 92 189 IPR036236 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele42g0943 Lele-ChrLele42 22148016 22161731 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele42g0943 1 546 IDZ Gene Family AT1G55110 47.350 2.01e-126 399
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Lele42g0943 NB-ARC 3.3e-10 CL0023