Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele42g0930 ATGGACAAACGACGCCGCATGCATGGGAAAGTGTTTAAGTCACACATATTTGGGAGCCCCACTATAGTTTCGACAGAAGCAGAGCTTAACAAGTTTATTCTGCAGAGTGATTCGAAGGTTTTTGTTCCTTTTTATCCAAAATCTCTCACTGTGTTGATGGGAGAGTCCTCTATTTTGCTCATTAATGGAAGCTTACAGAGAAGAATACATGGGCTCATTGGAGCTTTCTTCAAGTCTCAGCAACTTAAAGCTCAGATTACCAGAGATATGCAAGATTATGTCCAAAAATCAATGGCAAAATGGAGAGACGACAGCCTCCTATACATACAAGATGAAACAAAAAACATTGCCTTTCAAGTACTAGTGAAGGCTTTGATTAGCTTGGATCCAGGTGAAGAAATGCAGCTTCTCATGAAACACTTTCAAGAATTCATCTCAGGCCTCATGGTAAAAAGGAAGAGGGGAATATGTAAAGTTGCAAAAGATGTAGTGGATGTGCTACTGAATGATTCAAGTGAGCAATTAACAGATAATTTAATAGCAGATAATATGATTGATATGATGATCCCAGGAGAGGACTCAGTACCTGTTCTTATGACTCTAGCTGTCAAATATTTATCAGAATGCCCTCCTGCTTTGCAACAATTAACGGACAAAGACATGAGCAATTGCAATTTCACAGCGTTTGGAGGAGGACAAAGGCTGTGCCCTGGTCTTGATTTGGCCAGACTTGAAGCTTCCATCTTCCTCTACCAATTTGTTACTCAATTCAGATGGTATGCAGAAGAAGACACAATTGTGAACTTCCCCACGGTCAGAATGAAAAGGAGAATGCCAATATGGGTAAAAAGATTGGAACCTTGA 864 0.4005 MDKRRRMHGKVFKSHIFGSPTIVSTEAELNKFILQSDSKVFVPFYPKSLTVLMGESSILLINGSLQRRIHGLIGAFFKSQQLKAQITRDMQDYVQKSMAKWRDDSLLYIQDETKNIAFQVLVKALISLDPGEEMQLLMKHFQEFISGLMVKRKRGICKVAKDVVDVLLNDSSEQLTDNLIADNMIDMMIPGEDSVPVLMTLAVKYLSECPPALQQLTDKDMSNCNFTAFGGGQRLCPGLDLARLEASIFLYQFVTQFRWYAEEDTIVNFPTVRMKRRMPIWVKRLEP 287
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele42g0930 287 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 229 238 IPR017972 GO:0005506|GO:0016705
Lele42g0930 287 Gene3D Cytochrome P450 220 285 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lele42g0930 287 Pfam Cytochrome P450 221 265 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lele42g0930 287 SUPERFAMILY Cytochrome P450 2 283 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lele42g0930 287 Gene3D Cytochrome P450 1 219 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lele42g0930 287 PANTHER CYTOCHROME P450 26 225 266 - -
Lele42g0930 287 PRINTS E-class P450 group I signature 226 236 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lele42g0930 287 PRINTS E-class P450 group I signature 236 259 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lele42g0930 287 PRINTS E-class P450 group I signature 5 24 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele42g0930 Lele-ChrLele42 22023356 22028943 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele42g0930 218 258 Cytochrome P450 AT3G13730 65.854 8.40e-14 69.3