Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele42g0924 ATGGCTTTAGAGAAATGCCAGCTCAAGCCAACCATTAGCAGGATTCCAAATCTATTGGACTCTTCTGGTGAGTTTGATCCTGAAACTCGATTCTTGCAAGTTGCAATCCGACTTATAGAGAATATGCAACTCTGGGCTGATTCCTATGTACCGTGCACAAGAATGATGAATGTAGGGGATCATTGCCGATTGCAACTGCAATTGCAATTGGGACTACGACAGACCAATTGGGACGGGACACCTGAACACCACTACCTAAAGGATAAGTGTAAAAGACAATGGCCAAATTCGTCTGTGAATCTGGTTGATCCTGGAATCGAGTGTTCTCATACTTCAGTCTCATCCGAACTTCAGACTTTAGTTGATACCATTTGCTTGTTCAATAAATGTTTGACGAGGGATTTCTCATGGATTTGTCTCCGAGATTTTGATTTCACTTCCTTTTGCACTCAAAGGAGCTTCATTGACATCGTGAATATTCTCTTTCTCTGTGCGTTTTACGTATCCTTGCTTTGCAATTTGATCAGAAAAACCAATGCAGGTGACAGACACAGAAAAGGATGGGTTTGTTCAGTTGTCTCAGTCTGTTGTGCTCTCATAAGCATCGCATATTTCAGTAATGGTCTGTGGTGTCTTATTTCCAAATCTGAAGACTTTAGGAAGTTGGGGTGGTTAGTTTATCTTTTCAGAGGACTAGTCTGGATCTCTCTAACGGTTTCTTTACTTGTTCAGAGATCTAAATGTCTGCAAGTTCTAAACCTTTTTTGGTGGGTCTCTTCATGCACACTCGTTTCAGCTCTCAATATTGAGATTCTGTTGAAAGAGCATAACATTCAAATACTTGATCTGGTTCAATGGCCAGTGCATTTTTCACTTGTTTTCTGTGCCTTCCAAAGCCTCTATTTTGCTCCTCAAAGCACTCAAAATACCACTATGTCAGAGCCTCTTTTAGCTGAGAAGGATGAAAATCAACAATCAAAACTTGCACGTGCCAATTTTCTCAGCAAATTGACTTTCTCATGGATTAATTCCTTATTGAATTTGGGCTATTCAAAGCCATTAGCTCTTGAAGACATCCCATCTCTTGTTTCTGATGATGAAGCTGCTTTAGCCTACCAAAAGTTTTCTCATGTATGGGATTCTTATTCAAGGTATAGGACACAGAGCAATAATACCAAAAACTTGGTCATGTGGTCTATATTAAGAGTTTACTTGAAAGAGAACATTCTCATAGCAATCTTGGCATTGCTCAGAACAATTTCTGTAGTAATTTCTCCTTTGTTGCTCTATGCTTTTGTGAACTATTCAAAAACTAAAGAGGAAAATCTGAGGGAGGGTCTTGCCATAGTAGGTTGTCTGATTATTTGCAAGGTAATTGAATCTCTCTCTCAAAGGCACTGGTTTTTTCAATCAAGAAGGTTAGGAATGAGAATGAGGTCAGCTCTAATGGTGGCAATATATAACAAGCAGTTGAAGCTTTCAAGCGCAGCCAGAAGAAGACACTCAACTGGGGAGATAGTGAATTATATAGCAGTTGATGCATATAGAATGGGAGAATTTCCTTGGTGGTTTCACACCACATGGACTTCAGTAGTACAACTTTTTCTATCTATTGGGGTTCTATTTGGTGTCGTTGGTCTCGGTGCTCTTCCTGGTTTAATCCCTCTTCTCATATGTGGCTTTCTTAATATACCCTTTGCAAAGATCATTCAGAAGTGTCAGTCAGAATTCATGGTTGCACAGGATGAACGTCTAAGGTCAACTTCAGAGATCCTAAATAATATGAAAATCATAAAGTTGCAATCTTGGGAGGAAAAGTTCAAGACCTTGGTAGAAAGCCTTCGTGCCAAAGAGTTCAAGTGGTTGGCTAAGGCACAGCTCATAAAAGCACATGGATCATTTGTGTATTGGATGTCTCCAACGATTGTTTCCTCTGTAATCTTCCTAGGATGTGCCCTCTTGCAAAGTTCCCGTTTAAATGCTGGAGCCATATTCACTATTCTCGCTACTTTGAGGACCATGAGTGAACCTGTTAGATTTATTCCAGAGGCTCTTTCTGTTATAATCCAAGTTAAGGTCTCCTTTGATCGTCTCAACGCCTTTTTGCTTGATGATGAGCTAAGTGATAATGTCACTGAAAGAAACAAAATGCAAAATTCAGTTAACAGTGTGGAAATTCAAGCAGGTAACTTCAGTTGGGATCCGGAATCGATGTCTCCAACTTTGAGAGATTTGAATGTAGAAATCAAATGGGGACAGAAAATTTCAATTTGTGGGCCAGTTGGAGGTGGAAAATCATCCTTGATATATGCAATTCTCGGCGTGATACCCAAAATTTCAGGAACTGTTAACGTGGGTGGAACAGTTGCCTATGTTTCTCAAACATCTTGGATCCAAAGTGGGACAATTCGAGAAAATATACTCTTCGGCAAACTGATGGATGAAACCAGATATGAGAATGCCATAAAAGTCTGTGCCTTGGATAAGGATATGAATGCTTTTAGCCATGGTGATCTCACAGAAATAGGTCAGCGAGGGATCAACTTGAGTGGAGGACAAAAGCAAAGGATTCAACTGGCTCGTGCAGTATATAGTGATGCTGAAGTTTATCTCTTAGATGACCCTTTCAGTGCTGTGGATGCACATACTGCTGCTATTCTATTCAATGAATGTGTCTTGAATGCTCTGAAGAAGAAAACCGTAATTCTAGTGACTCATCAAGTGGAGTTTCTCTCACAAGTTGATAAAATCCTTGTCATGGAGGGTGGAGTAGTTACTCAATCAGGATGTTATGAAGATCTTCTCACAGAAGGAACAGCCTTTGAAAAACTTGTACATGCACATAGAGAAGCAATTTCAGGGTCAGATCAAAACAATGATATCACTGGAGAATTTGAAGATGTCATGAACGTTCTTCAGCCATTGGAGTCTCATGGATTTCATCACTCTGAGGATCATAAGACTGAGCAGGTTTCTACCAAAGGTCAGGTGTCACAACTTACACAAGAAGAAGAAAAGGAGATTGGAAATGTTGGCTGGGAGCCATTTTGGGATTATATTTATCTCTCCAATGGATCATTACTTCTGTGTTTGACCATTTTAGCACAGGCGGCTTTTATAGGTTTGCAAGCAGCATCAACGTTTTGGCTTGCTCTAGCCATTGAGGTGCCAAAACTAACTAATGGCATCTTGATTGGAGTTTACACAGTAGTTTCACTTCTAGGTGTTGGCTTTGTGTGGCTAAGAACTATCATGGGTGCACATCTGGGATTAAAAGCTTCTACTTCTTTCTTCTCCGGCTTCAATAATGCTATCTTCAAGGCTCCTATGCTCTTCTTTGACTCAACCCCAGTAGGGCGAATTTTTACCCGAGCTTCGTCAGATTTGAGTACATTAGACTTTGATATACCTTATGGACTCACCTTTGCAACAGCTGGTGCAATGGAACTTCTGACAATAACTGGGATAATGGCTTCAGTCACGTGGCAAGTACTTATTGTTGCAGTTCCCGCCTTAATAACTTCTAAATACATTCAGGGCTATTATGAAGCCTCTGCAAGGGAACTAATGAGAATCAATGGAACCACCAAAGCTCCAGTCATGAATTTCGCCACCGAGACATCACTAGGAGTGGTGACTGTGAGAGCTTTCAACATGGCAGAAGGATTTTACCAAAATAACCTCAAGCTTGTGGACACAGATGCAACACTATTCTTTCATTCCAATGTGGCCACAGAATGGTTAATTTTAAGGATTGACGTACTTCAGAATTTGACACTCTTCACAGCAGCTTTACTGCTTGTTCTACTTCCAAAGGGACTTGTGCCCCCAGGCCTTGCAGGACTCTCTCTATCATATGCTTTATCATTGACAGCATGCCAAAATTTTATGAGTCGATGGCTCTGCAACTTATCAAATAATATTGTTTCCGTTGAAAGAATTAAGCAGTTCATTCACATACCAGAAGAGCCTCCTGCAATTGTGGAGAACAGAAAACCTCCTCTTTCATGGCCTTCCAAGGGTAGGATTGAGCTTCAAAATCTTGAGATACGGTATCGTCCAAATGCTCCATTAGTCCTTAAGGGAATTACTTGTACATTTAAAGAAGGGAGCAGAGTGGGAATTGTAGGGAGGACTGGAAGTGGAAAAAGTACACTTGTAACTGCTCTGTTTCGGTTGGTTGATCCTGCAAGAGGTGATATTCTTATAGATGGGATCAGCATATCACCAATGGGTTTGAAGGATTTGAGGATGAAGCTCAGCATTATTCCTCAAGAACCCACTCTGTTCAAGGGCAGCATTAGAACCAACTTGGATCCTCTAGGCCTCTACTCTGATGATGAAATCTGGGAGGCTTTAGAGAAATGCCAGCTCAAGTCAACAATCAGGAGGCTACAAAATCTATTGGACTCTTCTGTGAATGATGAAGGTGAAAATTGGAGTGTAGGACAACGTCAACTGTTATGTCTAGGAAGAGTACTTCTGAAGCGAAATAAGATTCTTGTTCTTGATGAAGCTACTGCTTCCATTGATTCTACCACTGATGCCATTTTACAGCAAGTTATTAGACAAGAATTTACAGGATGTACAGTTATAACTATAGCTCATCGAGTTCCAACTGTAATAGACAGTGATATGGTTATGGTCCTCTCTTATGGGAAAGTGGTGGAATATGATGAGCCTTCAAAGCTTATGGAGACAAACTCTTCTTTCTCTAAACTTGTTGCTGAGTATTGGTCAAGCCGCAACAAGAACCTCTCCTAA 4764 0.4058 MALEKCQLKPTISRIPNLLDSSGEFDPETRFLQVAIRLIENMQLWADSYVPCTRMMNVGDHCRLQLQLQLGLRQTNWDGTPEHHYLKDKCKRQWPNSSVNLVDPGIECSHTSVSSELQTLVDTICLFNKCLTRDFSWICLRDFDFTSFCTQRSFIDIVNILFLCAFYVSLLCNLIRKTNAGDRHRKGWVCSVVSVCCALISIAYFSNGLWCLISKSEDFRKLGWLVYLFRGLVWISLTVSLLVQRSKCLQVLNLFWWVSSCTLVSALNIEILLKEHNIQILDLVQWPVHFSLVFCAFQSLYFAPQSTQNTTMSEPLLAEKDENQQSKLARANFLSKLTFSWINSLLNLGYSKPLALEDIPSLVSDDEAALAYQKFSHVWDSYSRYRTQSNNTKNLVMWSILRVYLKENILIAILALLRTISVVISPLLLYAFVNYSKTKEENLREGLAIVGCLIICKVIESLSQRHWFFQSRRLGMRMRSALMVAIYNKQLKLSSAARRRHSTGEIVNYIAVDAYRMGEFPWWFHTTWTSVVQLFLSIGVLFGVVGLGALPGLIPLLICGFLNIPFAKIIQKCQSEFMVAQDERLRSTSEILNNMKIIKLQSWEEKFKTLVESLRAKEFKWLAKAQLIKAHGSFVYWMSPTIVSSVIFLGCALLQSSRLNAGAIFTILATLRTMSEPVRFIPEALSVIIQVKVSFDRLNAFLLDDELSDNVTERNKMQNSVNSVEIQAGNFSWDPESMSPTLRDLNVEIKWGQKISICGPVGGGKSSLIYAILGVIPKISGTVNVGGTVAYVSQTSWIQSGTIRENILFGKLMDETRYENAIKVCALDKDMNAFSHGDLTEIGQRGINLSGGQKQRIQLARAVYSDAEVYLLDDPFSAVDAHTAAILFNECVLNALKKKTVILVTHQVEFLSQVDKILVMEGGVVTQSGCYEDLLTEGTAFEKLVHAHREAISGSDQNNDITGEFEDVMNVLQPLESHGFHHSEDHKTEQVSTKGQVSQLTQEEEKEIGNVGWEPFWDYIYLSNGSLLLCLTILAQAAFIGLQAASTFWLALAIEVPKLTNGILIGVYTVVSLLGVGFVWLRTIMGAHLGLKASTSFFSGFNNAIFKAPMLFFDSTPVGRIFTRASSDLSTLDFDIPYGLTFATAGAMELLTITGIMASVTWQVLIVAVPALITSKYIQGYYEASARELMRINGTTKAPVMNFATETSLGVVTVRAFNMAEGFYQNNLKLVDTDATLFFHSNVATEWLILRIDVLQNLTLFTAALLLVLLPKGLVPPGLAGLSLSYALSLTACQNFMSRWLCNLSNNIVSVERIKQFIHIPEEPPAIVENRKPPLSWPSKGRIELQNLEIRYRPNAPLVLKGITCTFKEGSRVGIVGRTGSGKSTLVTALFRLVDPARGDILIDGISISPMGLKDLRMKLSIIPQEPTLFKGSIRTNLDPLGLYSDDEIWEALEKCQLKSTIRRLQNLLDSSVNDEGENWSVGQRQLLCLGRVLLKRNKILVLDEATASIDSTTDAILQQVIRQEFTGCTVITIAHRVPTVIDSDMVMVLSYGKVVEYDEPSKLMETNSSFSKLVAEYWSSRNKNLS 1587
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele42g0924 1587 Gene3D - 1326 1577 IPR027417 -
Lele42g0924 1587 Gene3D ABC transporter type 1, transmembrane domain 992 1324 IPR036640 GO:0005524|GO:0016020
Lele42g0924 1587 FunFam Multidrug resistance protein associated1 703 967 - -
Lele42g0924 1587 Pfam ABC transporter 1360 1508 IPR003439 GO:0005524
Lele42g0924 1587 Gene3D - 721 953 IPR027417 -
Lele42g0924 1587 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 1031 1306 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Lele42g0924 1587 SMART AAA_5 1369 1562 IPR003593 -
Lele42g0924 1587 SMART AAA_5 751 924 IPR003593 -
Lele42g0924 1587 ProSitePatterns ABC transporters family signature. 849 863 IPR017871 GO:0005524|GO:0016887
Lele42g0924 1587 PANTHER ATP-BINDING CASSETTE SUB-FAMILY C 329 1580 - -
Lele42g0924 1587 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 409 690 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Lele42g0924 1587 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 1333 1576 IPR027417 -
Lele42g0924 1587 CDD ABC_6TM_ABCC_D1 410 698 IPR044746 GO:0140359
Lele42g0924 1587 SUPERFAMILY ABC transporter transmembrane region 1026 1325 IPR036640 GO:0005524|GO:0016020
Lele42g0924 1587 FunFam ABC transporter C family member 5 992 1324 - -
Lele42g0924 1587 CDD ABCC_MRP_domain1 724 923 - -
Lele42g0924 1587 CDD ABCC_MRP_domain2 1341 1561 - -
Lele42g0924 1587 Pfam ABC transporter 742 876 IPR003439 GO:0005524
Lele42g0924 1587 Gene3D ABC transporter type 1, transmembrane domain 396 707 IPR036640 GO:0005524|GO:0016020
Lele42g0924 1587 FunFam ABC transporter C family member 10 392 706 - -
Lele42g0924 1587 SUPERFAMILY ABC transporter transmembrane region 397 704 IPR036640 GO:0005524|GO:0016020
Lele42g0924 1587 FunFam ABC transporter C family member 3 1326 1577 - -
Lele42g0924 1587 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 1343 1577 IPR003439 GO:0005524
Lele42g0924 1587 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 720 946 IPR027417 -
Lele42g0924 1587 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 726 947 IPR003439 GO:0005524
Lele42g0924 1587 CDD ABC_6TM_ABCC_D2 1025 1318 IPR044726 GO:0140359
Lele42g0924 1587 Pfam ABC transporter transmembrane region 1063 1286 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Lele42g0924 1587 Pfam ABC transporter transmembrane region 411 677 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele42g0924 Lele-ChrLele42 21969896 21980678 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele42g0924 724 959 Calmodulin-binding Proteins AT2G36910 27.344 7.81e-22 101